Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL079305.1-201ENST00000623159 3008 ntBASIC3.38□□□□□ -1.87
HLA-DOAP06340 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DOAP06340 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DOAP06340 Y_RNA.105-201ENST00000363182 111 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 RNU6-595P-201ENST00000363944 107 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 RNU6-336P-201ENST00000364891 107 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 Z98749.2-208ENST00000381646 500 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 RNU6-217P-201ENST00000384164 104 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 SNORA51.11-201ENST00000384442 131 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 HSPE1P26-201ENST00000405341 275 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DOAP06340 MTCO3P8-201ENST00000453691 755 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 RNA5SP310-201ENST00000459084 116 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 RPS29P20-201ENST00000489592 171 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 RNU6-1282P-201ENST00000516735 96 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DOAP06340 MIR3162-201ENST00000581818 82 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 AC100812.1-201ENST00000607622 580 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 AC009318.2-201ENST00000610917 651 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 MIR8076-201ENST00000611401 83 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DOAP06340 AC097372.5-201ENST00000623665 376 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 AC233263.6-201ENST00000631132 1963 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
HLA-DOAP06340 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DOAP06340 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DOAP06340 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 RNU6-884P-201ENST00000363889 107 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 RNU6-658P-201ENST00000384606 106 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 MIR625-201ENST00000385047 85 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 RNU6-130P-201ENST00000411112 103 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC098614.2-201ENST00000426040 255 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC013470.1-201ENST00000453438 462 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 MTND1P19-201ENST00000511780 315 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 RNY3P15-201ENST00000516297 97 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC005357.1-201ENST00000588399 301 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AL645944.1-201ENST00000603857 493 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC016727.2-201ENST00000603988 621 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC005046.1-201ENST00000608515 625 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AL442067.1-201ENST00000613261 223 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC004852.3-201ENST00000614131 326 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC078938.1-201ENST00000620993 318 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AC048347.1-201ENST00000624621 427 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 AL359693.1-201ENST00000614959 2407 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
HLA-DOAP06340 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DOAP06340 MTND5P7-201ENST00000413558 1798 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AP000560.1-201ENST00000624150 1937 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AC062016.1-201ENST00000355719 319 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU6-270P-201ENST00000364131 105 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 Y_RNA.447-201ENST00000384184 113 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 Y_RNA.461-201ENST00000384263 103 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU6-1026P-201ENST00000384465 108 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU2-37P-201ENST00000410695 177 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AC099548.1-201ENST00000421443 426 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AC063976.3-201ENST00000426849 329 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 TOMM20P4-201ENST00000427861 435 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 ARL5AP4-201ENST00000430731 512 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DOAP06340 RPL23AP22-201ENST00000437556 453 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DOAP06340 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DOAP06340 U8.21-201ENST00000459536 136 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU6-1143P-201ENST00000516125 104 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNA5SP309-201ENST00000516670 106 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU7-4P-201ENST00000516961 62 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU6-1183P-201ENST00000517054 60 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 RNU6-897P-201ENST00000517135 105 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DOAP06340 ZNF192P1-203ENST00000565888 810 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 VN1R91P-201ENST00000594377 169 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DOAP06340 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.35□□□□□ -1.87
HLA-DOAP06340 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DOAP06340 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DOAP06340 RNU6-78P-201ENST00000362897 107 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 Y_RNA.123-201ENST00000363338 102 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 RNU5E-7P-201ENST00000365290 117 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 Y_RNA.376-201ENST00000365638 108 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DOAP06340 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DOAP06340 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DOAP06340 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DOAP06340 RNU6-377P-201ENST00000515965 102 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 RNU6-703P-201ENST00000516946 107 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 IGHV3-76-201ENST00000522465 295 ntBASIC3.34□□□□□ -1.87
HLA-DOAP06340 AC023157.2-201ENST00000540596 141 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms