Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.21□□□□□ -2.06
PDGFBP01127 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFBP01127 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDGFBP01127 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDGFBP01127 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 Y_RNA.38-201ENST00000362617 102 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 SNORD56.1-201ENST00000362913 68 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 RNU6-527P-201ENST00000363425 104 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 MIR548F1-201ENST00000408667 84 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 RNU2-3P-201ENST00000410144 191 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.2□□□□□ -2.06
PDGFBP01127 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.2□□□□□ -2.06
PDGFBP01127 AL031274.1-201ENST00000450334 232 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 RNU7-180P-201ENST00000459240 63 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AC082651.2-201ENST00000496833 166 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AC005840.1-201ENST00000498412 377 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 CCDC34P1-201ENST00000507441 517 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 SNORA31.11-201ENST00000516528 139 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 RNA5SP137-201ENST00000516833 135 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 AP003034.1-201ENST00000534621 422 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 AC123912.5-201ENST00000605470 343 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 AP001486.3-201ENST00000615334 372 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
PDGFBP01127 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
PDGFBP01127 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.2□□□□□ -2.06
PDGFBP01127 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFBP01127 MIR6073-201ENST00000352083 89 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 MIR337-201ENST00000362281 93 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 RNU6-457P-201ENST00000363999 107 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 SNORD115-47-201ENST00000391226 86 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 RAP1BP3-201ENST00000407180 549 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.19□□□□□ -2.06
PDGFBP01127 RNA5SP181-201ENST00000410246 98 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 RNU6-607P-201ENST00000411283 108 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 EDDM3CP-201ENST00000415977 425 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 USP9YP27-201ENST00000418455 438 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 BTF3P4-201ENST00000418852 495 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFBP01127 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.19□□□□□ -2.06
PDGFBP01127 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.19□□□□□ -2.06
PDGFBP01127 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFBP01127 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.19□□□□□ -2.06
PDGFBP01127 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFBP01127 RNU6-261P-201ENST00000459506 102 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 MTCO3P38-201ENST00000468910 766 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 AC083798.1-201ENST00000472671 131 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 AC019235.1-201ENST00000503847 207 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.19□□□□□ -2.06
PDGFBP01127 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 MTND1P35-201ENST00000526739 508 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 HMGB1P33-201ENST00000563485 527 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 AC007229.1-201ENST00000590455 412 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 RPL30P11-203ENST00000598995 310 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 Z82243.1-201ENST00000609432 473 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 U2.17-201ENST00000611454 95 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 uc_338.15-201ENST00000615470 191 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 uc_338.11-201ENST00000619132 160 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 YWHAEP7-203ENST00000622054 312 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 AC022418.1-201ENST00000624118 445 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 AC098679.4-201ENST00000624241 654 ntBASIC2.19□□□□□ -2.06
PDGFBP01127 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.19□□□□□ -2.06
PDGFBP01127 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.19□□□□□ -2.06
PDGFBP01127 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PDGFBP01127 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFBP01127 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDGFBP01127 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
PDGFBP01127 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDGFBP01127 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PDGFBP01127 RNU6-942P-201ENST00000363002 107 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 RNU6-529P-201ENST00000363383 104 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 RNU5E-7P-201ENST00000365290 117 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 Y_RNA.373-201ENST00000365600 103 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 Y_RNA.378-201ENST00000365652 113 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 Y_RNA.481-201ENST00000384373 102 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.18□□□□□ -2.06
PDGFBP01127 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.18□□□□□ -2.06
PDGFBP01127 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PDGFBP01127 MTCO1P20-201ENST00000425366 358 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 AC087884.1-201ENST00000469738 328 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 RPL30P12-201ENST00000474666 353 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.18□□□□□ -2.06
PDGFBP01127 LRRC34P2-201ENST00000514850 553 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 RNU6-586P-201ENST00000517265 104 ntBASIC2.18□□□□□ -2.06
PDGFBP01127 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.18□□□□□ -2.06
PDGFBP01127 AL118558.2-201ENST00000556294 238 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms