Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SNORA16.2-201ENST00000390991 127 ntBASIC1.82□□□□□ -2.12
MBD3O95983 SNORA3.2-201ENST00000408221 125 ntBASIC1.82□□□□□ -2.12
MBD3O95983 Y_RNA.597-201ENST00000410463 100 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD3O95983 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.82□□□□□ -2.12
MBD3O95983 MTATP6P18-201ENST00000417994 673 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD3O95983 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
MBD3O95983 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD3O95983 AC078809.1-201ENST00000427601 140 ntBASIC1.82□□□□□ -2.12
MBD3O95983 BET1P1-201ENST00000482276 359 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC098862.1-201ENST00000504991 413 ntBASIC1.82□□□□□ -2.12
MBD3O95983 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD3O95983 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MBD3O95983 RN7SKP219-201ENST00000516825 296 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC008088.1-201ENST00000580993 280 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD3O95983 AC040904.1-201ENST00000590850 223 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AL078605.1-201ENST00000603529 500 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC025449.1-201ENST00000603896 529 ntBASIC1.82□□□□□ -2.12
MBD3O95983 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
MBD3O95983 AC064859.1-201ENST00000624741 174 ntBASIC1.82□□□□□ -2.12
MBD3O95983 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MBD3O95983 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MBD3O95983 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
MBD3O95983 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
MBD3O95983 RNU5A-6P-201ENST00000384136 116 ntBASIC1.81□□□□□ -2.12
MBD3O95983 RN7SKP61-201ENST00000410642 295 ntBASIC1.81□□□□□ -2.12
MBD3O95983 RN7SKP142-201ENST00000411236 328 ntBASIC1.81□□□□□ -2.12
MBD3O95983 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.81□□□□□ -2.12
MBD3O95983 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.81□□□□□ -2.12
MBD3O95983 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.81□□□□□ -2.12
MBD3O95983 SCARNA18-201ENST00000459004 134 ntBASIC1.81□□□□□ -2.12
MBD3O95983 MTND3P5-201ENST00000512798 333 ntBASIC1.81□□□□□ -2.12
MBD3O95983 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.81□□□□□ -2.12
MBD3O95983 AL137161.1-201ENST00000532231 390 ntBASIC1.81□□□□□ -2.12
MBD3O95983 AC007834.2-201ENST00000536310 343 ntBASIC1.81□□□□□ -2.12
MBD3O95983 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.81□□□□□ -2.12
MBD3O95983 MIR4528-201ENST00000577763 90 ntBASIC1.81□□□□□ -2.12
MBD3O95983 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.81□□□□□ -2.12
MBD3O95983 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.81□□□□□ -2.12
MBD3O95983 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.81□□□□□ -2.12
MBD3O95983 AC116312.1-201ENST00000606841 314 ntBASIC1.81□□□□□ -2.12
MBD3O95983 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.81□□□□□ -2.12
MBD3O95983 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.81□□□□□ -2.12
MBD3O95983 ZNF680P1-201ENST00000436625 1469 ntBASIC1.81□□□□□ -2.12
MBD3O95983 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
MBD3O95983 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MBD3O95983 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MBD3O95983 RNU1-58P-201ENST00000362413 163 ntBASIC1.8□□□□□ -2.12
MBD3O95983 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
MBD3O95983 SNORD32B-201ENST00000364460 84 ntBASIC1.8□□□□□ -2.12
MBD3O95983 RNU6-1303P-201ENST00000364841 107 ntBASIC1.8□□□□□ -2.12
MBD3O95983 RNU6-517P-201ENST00000384362 110 ntBASIC1.8□□□□□ -2.12
MBD3O95983 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MBD3O95983 AL117339.3-201ENST00000418733 162 ntBASIC1.8□□□□□ -2.12
MBD3O95983 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.8□□□□□ -2.12
MBD3O95983 MTCO2P34-201ENST00000421994 607 ntBASIC1.8□□□□□ -2.12
MBD3O95983 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.8□□□□□ -2.12
MBD3O95983 AL360221.1-201ENST00000445989 335 ntBASIC1.8□□□□□ -2.12
MBD3O95983 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.8□□□□□ -2.12
MBD3O95983 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.8□□□□□ -2.12
MBD3O95983 AC009646.1-201ENST00000510455 318 ntBASIC1.8□□□□□ -2.12
MBD3O95983 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MBD3O95983 AC069113.1-201ENST00000517763 267 ntBASIC1.8□□□□□ -2.12
MBD3O95983 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
MBD3O95983 SUB1P2-201ENST00000556401 297 ntBASIC1.8□□□□□ -2.12
MBD3O95983 RSL24D1P11-201ENST00000591045 491 ntBASIC1.8□□□□□ -2.12
MBD3O95983 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.8□□□□□ -2.12
MBD3O95983 AC004908.3-201ENST00000610248 625 ntBASIC1.8□□□□□ -2.12
MBD3O95983 AC073114.1-201ENST00000612027 490 ntBASIC1.8□□□□□ -2.12
MBD3O95983 AL158063.1-201ENST00000615349 536 ntBASIC1.8□□□□□ -2.12
MBD3O95983 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.8□□□□□ -2.12
MBD3O95983 RNU6-336P-201ENST00000364891 107 ntBASIC1.79□□□□□ -2.12
MBD3O95983 RNU6-348P-201ENST00000384386 107 ntBASIC1.79□□□□□ -2.12
MBD3O95983 RNU6-903P-201ENST00000391270 109 ntBASIC1.79□□□□□ -2.12
MBD3O95983 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.79□□□□□ -2.12
MBD3O95983 RNU6-293P-201ENST00000411259 106 ntBASIC1.79□□□□□ -2.12
MBD3O95983 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
MBD3O95983 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.79□□□□□ -2.12
MBD3O95983 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.79□□□□□ -2.12
MBD3O95983 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
MBD3O95983 UBE2V1P4-201ENST00000425374 344 ntBASIC1.79□□□□□ -2.12
MBD3O95983 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
MBD3O95983 SNRPFP3-201ENST00000457792 225 ntBASIC1.79□□□□□ -2.12
MBD3O95983 RNU7-167P-201ENST00000459160 62 ntBASIC1.79□□□□□ -2.12
MBD3O95983 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.79□□□□□ -2.12
MBD3O95983 AC008549.1-201ENST00000512900 643 ntBASIC1.79□□□□□ -2.12
MBD3O95983 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
MBD3O95983 OSBPL9P5-201ENST00000542581 171 ntBASIC1.79□□□□□ -2.12
MBD3O95983 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.79□□□□□ -2.12
MBD3O95983 AGGF1P4-201ENST00000568249 801 ntBASIC1.79□□□□□ -2.12
MBD3O95983 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
MBD3O95983 AL034555.1-201ENST00000604816 211 ntBASIC1.79□□□□□ -2.12
MBD3O95983 AP000654.2-201ENST00000605633 586 ntBASIC1.79□□□□□ -2.12
MBD3O95983 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.79□□□□□ -2.12
MBD3O95983 AC136475.10-201ENST00000620253 385 ntBASIC1.79□□□□□ -2.12
MBD3O95983 AC078883.4-201ENST00000623218 367 ntBASIC1.79□□□□□ -2.12
MBD3O95983 MTND4P14-201ENST00000435799 1354 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms