Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN9O95484 KATNBL1P3-201ENST00000443475 909 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN9O95484 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN9O95484 SNORD42A-201ENST00000459584 64 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN9O95484 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
CLDN9O95484 AC009646.1-201ENST00000510455 318 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.67□□□□□ -2.14
CLDN9O95484 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.67□□□□□ -2.14
CLDN9O95484 RNU5F-2P-201ENST00000516066 82 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 AC104581.2-201ENST00000572227 430 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 BNIP3P25-201ENST00000596023 559 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 AC008945.2-201ENST00000606056 604 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 MIR1248-201ENST00000629190 106 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.67□□□□□ -2.14
CLDN9O95484 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
CLDN9O95484 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN9O95484 RNU1-58P-201ENST00000362413 163 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 Y_RNA.169-201ENST00000363745 96 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 Y_RNA.201-201ENST00000364052 96 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 RNU6-456P-201ENST00000384493 107 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 SNORA26.9-201ENST00000391322 122 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
CLDN9O95484 RNU4-46P-201ENST00000410818 138 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 MTND2P18-201ENST00000419962 1030 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 AL445567.1-201ENST00000439121 144 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC093259.1-201ENST00000509755 300 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 RNU6-377P-201ENST00000515965 102 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN9O95484 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC115990.1-201ENST00000526957 301 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 LRRC34P1-201ENST00000542742 915 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
CLDN9O95484 AL590229.1-201ENST00000603497 542 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 AL022345.1-201ENST00000607292 135 ntBASIC1.66□□□□□ -2.14
CLDN9O95484 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
CLDN9O95484 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDN9O95484 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLDN9O95484 RNU6-282P-201ENST00000365357 103 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
CLDN9O95484 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CLDN9O95484 U8.13-201ENST00000390842 128 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.65□□□□□ -2.15
CLDN9O95484 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.65□□□□□ -2.15
CLDN9O95484 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CLDN9O95484 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN9O95484 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN9O95484 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN9O95484 PPP1R2P5-201ENST00000457256 603 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 MTCO3P7-201ENST00000510008 774 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 MTCO3P28-201ENST00000513351 515 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC023050.3-201ENST00000541142 333 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.65□□□□□ -2.15
CLDN9O95484 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.65□□□□□ -2.15
CLDN9O95484 AC012414.6-201ENST00000568241 401 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC103987.3-201ENST00000582071 292 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 CYP2C61P-201ENST00000604072 290 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC107304.1-201ENST00000604229 296 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC123912.5-201ENST00000605470 343 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 Z99289.3-201ENST00000605586 594 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 AC084768.2-201ENST00000622736 221 ntBASIC1.65□□□□□ -2.15
CLDN9O95484 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CLDN9O95484 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLDN9O95484 RNU4-48P-201ENST00000365559 182 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 RNU6-293P-201ENST00000411259 106 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 AC133104.1-201ENST00000429100 218 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 AC243964.1-201ENST00000441814 261 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 RNA5SP269-201ENST00000459032 137 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN9O95484 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.64□□□□□ -2.15
CLDN9O95484 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.64□□□□□ -2.15
CLDN9O95484 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
CLDN9O95484 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.64□□□□□ -2.15
CLDN9O95484 AL356057.1-201ENST00000533798 831 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 MIR4703-201ENST00000577728 79 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.64□□□□□ -2.15
CLDN9O95484 AL034555.1-201ENST00000604816 211 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 MIR8070-201ENST00000616510 88 ntBASIC1.64□□□□□ -2.15
CLDN9O95484 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.64□□□□□ -2.15
CLDN9O95484 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
CLDN9O95484 RNU6-428P-201ENST00000362942 107 ntBASIC1.63□□□□□ -2.15
CLDN9O95484 RNU1-17P-201ENST00000363022 152 ntBASIC1.63□□□□□ -2.15
CLDN9O95484 Y_RNA.99-201ENST00000363138 105 ntBASIC1.63□□□□□ -2.15
CLDN9O95484 RNU6-1285P-201ENST00000363480 105 ntBASIC1.63□□□□□ -2.15
CLDN9O95484 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLDN9O95484 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLDN9O95484 SNORA12-201ENST00000391162 147 ntBASIC1.63□□□□□ -2.15
CLDN9O95484 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms