Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RNU6-371P-201ENST00000364283 108 ntBASIC1.15□□□□□ -2.23
VAPBO95292 Y_RNA.255-201ENST00000364581 97 ntBASIC1.15□□□□□ -2.23
VAPBO95292 SNORD1A-201ENST00000364968 72 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU6-142P-201ENST00000384019 107 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU6-296P-201ENST00000384608 107 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU6-360P-201ENST00000390944 104 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU6-482P-201ENST00000391068 107 ntBASIC1.15□□□□□ -2.23
VAPBO95292 MTCYBP36-201ENST00000404146 440 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU6-387P-201ENST00000411331 105 ntBASIC1.15□□□□□ -2.23
VAPBO95292 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPBO95292 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AC139712.2-201ENST00000424302 339 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AC007283.2-201ENST00000424739 197 ntBASIC1.15□□□□□ -2.23
VAPBO95292 HSPE1P9-201ENST00000440046 311 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.15□□□□□ -2.23
VAPBO95292 RPL31P3-201ENST00000458430 332 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPBO95292 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
VAPBO95292 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPBO95292 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.15□□□□□ -2.23
VAPBO95292 AC087883.1-201ENST00000551882 391 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AC008521.1-201ENST00000587471 187 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AL031775.1-201ENST00000607014 887 ntBASIC1.15□□□□□ -2.23
VAPBO95292 AP002371.2-201ENST00000624450 503 ntBASIC1.15□□□□□ -2.23
VAPBO95292 U4.7-201ENST00000638126 106 ntBASIC1.15□□□□□ -2.23
VAPBO95292 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VAPBO95292 MTND4P9-201ENST00000507819 1346 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU6-179P-201ENST00000363350 107 ntBASIC1.14□□□□□ -2.23
VAPBO95292 RNU6-1285P-201ENST00000363480 105 ntBASIC1.14□□□□□ -2.23
VAPBO95292 RNY1P12-201ENST00000364251 105 ntBASIC1.14□□□□□ -2.23
VAPBO95292 CALM2P2-201ENST00000428512 440 ntBASIC1.14□□□□□ -2.23
VAPBO95292 RPS6P15-201ENST00000431996 751 ntBASIC1.14□□□□□ -2.23
VAPBO95292 SNRPEP8-201ENST00000442866 260 ntBASIC1.14□□□□□ -2.23
VAPBO95292 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.14□□□□□ -2.23
VAPBO95292 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPBO95292 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
VAPBO95292 MTND4P33-201ENST00000556706 766 ntBASIC1.14□□□□□ -2.23
VAPBO95292 AC110760.3-201ENST00000598794 467 ntBASIC1.14□□□□□ -2.23
VAPBO95292 AP000811.1-201ENST00000603803 651 ntBASIC1.14□□□□□ -2.23
VAPBO95292 AL359757.2-201ENST00000624309 274 ntBASIC1.14□□□□□ -2.23
VAPBO95292 AC068205.3-201ENST00000636385 468 ntBASIC1.14□□□□□ -2.23
VAPBO95292 RNU4-1-201ENST00000363925 141 ntBASIC1.13□□□□□ -2.23
VAPBO95292 RNU6-1200P-201ENST00000384162 107 ntBASIC1.13□□□□□ -2.23
VAPBO95292 OR6C66P-201ENST00000414917 930 ntBASIC1.13□□□□□ -2.23
VAPBO95292 MTCYBP39-201ENST00000437562 491 ntBASIC1.13□□□□□ -2.23
VAPBO95292 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.13□□□□□ -2.23
VAPBO95292 MTND3P25-201ENST00000509243 135 ntBASIC1.13□□□□□ -2.23
VAPBO95292 RNU6-377P-201ENST00000515965 102 ntBASIC1.13□□□□□ -2.23
VAPBO95292 SNORA3.4-201ENST00000515969 96 ntBASIC1.13□□□□□ -2.23
VAPBO95292 RNU5A-4P-201ENST00000516588 111 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AC019176.1-201ENST00000518519 225 ntBASIC1.13□□□□□ -2.23
VAPBO95292 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.13□□□□□ -2.23
VAPBO95292 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.13□□□□□ -2.23
VAPBO95292 PCMTD1P2-201ENST00000565017 355 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AC091489.2-201ENST00000566263 604 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AL590229.1-201ENST00000603497 542 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AP000942.3-201ENST00000603702 160 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AC104073.3-201ENST00000610942 955 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.13□□□□□ -2.23
VAPBO95292 AL078604.3-201ENST00000615580 211 ntBASIC1.13□□□□□ -2.23
VAPBO95292 AL359740.1-201ENST00000624340 592 ntBASIC1.13□□□□□ -2.23
VAPBO95292 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
VAPBO95292 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
VAPBO95292 RNU6-105P-201ENST00000363909 104 ntBASIC1.12□□□□□ -2.23
VAPBO95292 RNU6-61P-201ENST00000365528 109 ntBASIC1.12□□□□□ -2.23
VAPBO95292 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.12□□□□□ -2.23
VAPBO95292 RNU6-1065P-201ENST00000384513 106 ntBASIC1.12□□□□□ -2.23
VAPBO95292 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
VAPBO95292 AC027119.1-201ENST00000440877 241 ntBASIC1.12□□□□□ -2.23
VAPBO95292 AL049829.1-201ENST00000465411 156 ntBASIC1.12□□□□□ -2.23
VAPBO95292 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
VAPBO95292 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.12□□□□□ -2.23
VAPBO95292 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.12□□□□□ -2.23
VAPBO95292 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.12□□□□□ -2.23
VAPBO95292 RNA5SP481-201ENST00000516814 122 ntBASIC1.12□□□□□ -2.23
VAPBO95292 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.12□□□□□ -2.23
VAPBO95292 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.12□□□□□ -2.23
VAPBO95292 AC109446.1-201ENST00000566172 220 ntBASIC1.12□□□□□ -2.23
VAPBO95292 AC105129.3-201ENST00000605455 485 ntBASIC1.12□□□□□ -2.23
VAPBO95292 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VAPBO95292 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VAPBO95292 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
VAPBO95292 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VAPBO95292 MIR340-201ENST00000362125 95 ntBASIC1.11□□□□□ -2.23
VAPBO95292 MIR302D-201ENST00000362275 68 ntBASIC1.11□□□□□ -2.23
VAPBO95292 RNU6-501P-201ENST00000364072 100 ntBASIC1.11□□□□□ -2.23
VAPBO95292 MIR620-201ENST00000385232 95 ntBASIC1.11□□□□□ -2.23
VAPBO95292 MRPL35P1-201ENST00000404272 572 ntBASIC1.11□□□□□ -2.23
VAPBO95292 Y_RNA.608-201ENST00000410647 95 ntBASIC1.11□□□□□ -2.23
VAPBO95292 RNU6-607P-201ENST00000411283 108 ntBASIC1.11□□□□□ -2.23
VAPBO95292 RPL37P10-201ENST00000412884 288 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC004965.1-201ENST00000413033 213 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AL590135.1-201ENST00000422215 156 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.11□□□□□ -2.23
VAPBO95292 AC019205.3-201ENST00000424573 156 ntBASIC1.11□□□□□ -2.23
VAPBO95292 CST2P1-201ENST00000425770 87 ntBASIC1.11□□□□□ -2.23
VAPBO95292 TOMM22P2-201ENST00000430735 237 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC016700.2-201ENST00000446011 156 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC015911.1-201ENST00000495111 156 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms