Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.96□□□□□ -1.78
VAMP4O75379 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.96□□□□□ -1.78
VAMP4O75379 RNU7-175P-201ENST00000515915 61 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 RNU6-388P-201ENST00000517012 105 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 RNU6-389P-201ENST00000517048 105 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 AC060766.3-201ENST00000591442 263 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.96□□□□□ -1.78
VAMP4O75379 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.96□□□□□ -1.78
VAMP4O75379 AC010615.1-201ENST00000594254 1764 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 Z75746.1-201ENST00000440243 2080 ntBASIC3.96□□□□□ -1.78
VAMP4O75379 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.96□□□□□ -1.78
VAMP4O75379 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAMP4O75379 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VAMP4O75379 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.19-201ENST00000362462 99 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 RNA5SP383-201ENST00000362934 120 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 RNU6-942P-201ENST00000363002 107 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.350-201ENST00000365409 98 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 RNU1-73P-201ENST00000383971 164 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.405-201ENST00000383979 100 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.451-201ENST00000384200 100 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.518-201ENST00000384552 113 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.524-201ENST00000384564 100 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 Y_RNA.561-201ENST00000384694 100 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 EI24P2-201ENST00000397776 1076 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.95□□□□□ -1.78
VAMP4O75379 RN7SL20P-201ENST00000488827 297 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 AC011373.1-201ENST00000607270 237 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 AC130454.1-201ENST00000622948 401 ntBASIC3.95□□□□□ -1.78
VAMP4O75379 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAMP4O75379 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VAMP4O75379 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.94□□□□□ -1.78
VAMP4O75379 Y_RNA.26-201ENST00000362539 101 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 RNU6-806P-201ENST00000365147 105 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 RNU6-658P-201ENST00000384606 106 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 RPEP5-201ENST00000441137 268 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 HMGB3P8-201ENST00000449709 577 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.94□□□□□ -1.78
VAMP4O75379 RPL23AP14-201ENST00000468281 468 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 AC025465.3-201ENST00000510570 311 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 SNORA70.24-201ENST00000517233 118 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.94□□□□□ -1.78
VAMP4O75379 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.94□□□□□ -1.78
VAMP4O75379 HSPE1P20-201ENST00000538133 289 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.94□□□□□ -1.78
VAMP4O75379 AL442163.3-201ENST00000554110 156 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.94□□□□□ -1.78
VAMP4O75379 RPL23AP78-201ENST00000599928 470 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 AC068831.7-201ENST00000616954 363 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 MIR6134-201ENST00000617606 109 ntBASIC3.94□□□□□ -1.78
VAMP4O75379 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAMP4O75379 FAM35BP-202ENST00000497389 3337 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 RNU6-527P-201ENST00000363425 104 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 RNU6-1026P-201ENST00000384465 108 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 MIR491-201ENST00000384877 84 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 RNA5SP293-201ENST00000410527 113 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.93□□□□□ -1.78
VAMP4O75379 HMGN2P30-201ENST00000423237 256 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 AC139712.2-201ENST00000424302 339 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 MTCO3P29-201ENST00000432119 779 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 RPL37P4-201ENST00000448908 268 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 LINC01399-202ENST00000458450 244 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 S100A11P2-201ENST00000467589 312 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.93□□□□□ -1.78
VAMP4O75379 RNU6-711P-201ENST00000517255 106 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.93□□□□□ -1.78
VAMP4O75379 H3F3AP1-201ENST00000559984 334 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 AC007318.2-201ENST00000620999 243 ntBASIC3.93□□□□□ -1.78
VAMP4O75379 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VAMP4O75379 Y_RNA.14-201ENST00000362415 103 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 RNU4-9P-201ENST00000364951 139 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 RNU6-898P-201ENST00000365627 104 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.92□□□□□ -1.78
VAMP4O75379 RNU6-708P-201ENST00000384217 107 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 Y_RNA.458-201ENST00000384240 102 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 Y_RNA.483-201ENST00000384380 101 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 Y_RNA.552-201ENST00000384665 112 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 Y_RNA.562-201ENST00000384695 113 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 SNORA11.1-201ENST00000408133 129 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 NDUFS5P4-201ENST00000412983 318 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 RPL32P35-201ENST00000415214 394 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.92□□□□□ -1.78
VAMP4O75379 RPL23AP49-201ENST00000492925 468 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 RNU6-397P-201ENST00000516226 104 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 Y_RNA.706-201ENST00000516933 99 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AP003733.2-201ENST00000529409 171 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AP002770.2-201ENST00000543613 532 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 CR383656.8-201ENST00000549046 145 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
VAMP4O75379 AL355877.2-201ENST00000603670 358 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AL356157.2-201ENST00000605122 111 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AL110115.1-201ENST00000614396 364 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 AC241585.2-209ENST00000638217 143 ntBASIC3.92□□□□□ -1.78
VAMP4O75379 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VAMP4O75379 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
VAMP4O75379 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.92□□□□□ -1.78
VAMP4O75379 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms