Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SNORA72.7-201ENST00000516349 94 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.62□□□□□ -1.83
TRIM13O60858 AC008011.1-201ENST00000545989 227 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM13O60858 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM13O60858 MIR4284-201ENST00000578924 81 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AC007448.1-201ENST00000582714 234 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AL645944.1-201ENST00000603857 493 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AC090132.2-201ENST00000615881 347 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM13O60858 AC006001.4-201ENST00000622243 395 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM13O60858 U4.7-201ENST00000638126 106 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM13O60858 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM13O60858 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM13O60858 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM13O60858 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM13O60858 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM13O60858 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM13O60858 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU6-834P-201ENST00000362367 110 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU6-600P-201ENST00000362524 99 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 SNORA31-201ENST00000362607 130 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 Y_RNA.121-201ENST00000363309 113 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU1-32P-201ENST00000363937 159 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 Y_RNA.245-201ENST00000364493 95 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 Y_RNA.331-201ENST00000365267 102 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 MIR184-201ENST00000384962 84 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 MIR32-201ENST00000384965 70 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 MIR153-2-201ENST00000385225 87 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU2-2P-201ENST00000410396 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM13O60858 WARS2P1-201ENST00000429678 537 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM13O60858 FABP5P15-201ENST00000453566 214 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM13O60858 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM13O60858 RPL23AP49-201ENST00000492925 468 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU4-57P-201ENST00000515980 135 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 AP002001.1-203ENST00000534002 267 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU2-4P-201ENST00000606190 192 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM13O60858 AC012531.5-201ENST00000611375 151 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.15-201ENST00000611544 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.16-201ENST00000613119 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.12-201ENST00000613778 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.9-201ENST00000615427 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.11-201ENST00000616345 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.2-201ENST00000616535 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.3-201ENST00000617785 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.19-201ENST00000618602 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 RNU2-1-201ENST00000618664 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.6-201ENST00000619225 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.5-201ENST00000619465 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 U2.10-201ENST00000620268 191 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 snoU18.1-201ENST00000629629 71 ntBASIC3.61□□□□□ -1.83
TRIM13O60858 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM13O60858 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM13O60858 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM13O60858 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM13O60858 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM13O60858 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM13O60858 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TRIM13O60858 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM13O60858 RNU6-961P-201ENST00000363893 105 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 RNU5E-7P-201ENST00000365290 117 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 RNU6-239P-201ENST00000390990 99 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM13O60858 VDAC1P3-201ENST00000434069 851 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM13O60858 CYCSP32-201ENST00000440548 321 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 AL353705.4-201ENST00000449661 238 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 PDCD5P2-201ENST00000507570 312 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 RNA5SP290-201ENST00000517133 127 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM13O60858 MIR4443-201ENST00000585052 53 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM13O60858 RMST_8.1-201ENST00000610287 165 ntBASIC3.6□□□□□ -1.83
TRIM13O60858 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM13O60858 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM13O60858 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM13O60858 AC009541.1-201ENST00000438279 2662 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TRIM13O60858 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM13O60858 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM13O60858 RNU6-1286P-201ENST00000383871 107 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 MIR34A-201ENST00000385130 110 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 SNORA40.19-201ENST00000390846 128 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 AC007919.1-201ENST00000429380 217 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 AL512844.2-201ENST00000433990 593 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 AC010618.1-201ENST00000469924 477 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 AC006463.2-201ENST00000473326 348 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 AF186996.7-201ENST00000492781 209 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 RNU7-121P-201ENST00000516604 62 ntBASIC3.59□□□□□ -1.83
TRIM13O60858 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms