Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RNU6-1281P-201ENST00000516223 105 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 SNORA48.11-201ENST00000517015 89 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 IGKV3-31-201ENST00000523109 329 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 CENPUP1-201ENST00000526649 1202 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.99□□□□□ -2.09
LCMT2O60294 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.99□□□□□ -2.09
LCMT2O60294 VN1R80P-201ENST00000597126 338 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AC073410.2-201ENST00000603240 332 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AC012557.2-201ENST00000605919 418 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 YWHAEP7-203ENST00000622054 312 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LCMT2O60294 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.98□□□□□ -2.09
LCMT2O60294 Y_RNA.38-201ENST00000362617 102 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 RNU6-527P-201ENST00000363425 104 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 Y_RNA.167-201ENST00000363735 109 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 SNORA70B-201ENST00000384210 135 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 RNU1-57P-201ENST00000384491 166 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LCMT2O60294 RNA5SP390-201ENST00000410191 113 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 POLHP1-201ENST00000411806 470 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 AL139156.1-201ENST00000412785 841 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.98□□□□□ -2.09
LCMT2O60294 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.98□□□□□ -2.09
LCMT2O60294 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.98□□□□□ -2.09
LCMT2O60294 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.98□□□□□ -2.09
LCMT2O60294 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.98□□□□□ -2.09
LCMT2O60294 RNU6-377P-201ENST00000515965 102 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.98□□□□□ -2.09
LCMT2O60294 AC233702.2-202ENST00000562547 291 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 MIR4648-201ENST00000580107 72 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.98□□□□□ -2.09
LCMT2O60294 RNU6-85P-201ENST00000605989 107 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 uc_338.15-201ENST00000615470 191 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 AC068137.4-201ENST00000638485 296 ntBASIC1.98□□□□□ -2.09
LCMT2O60294 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCMT2O60294 RNU1-23P-201ENST00000363361 144 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU6-336P-201ENST00000364891 107 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU6-827P-201ENST00000365553 106 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 MIR514A2-201ENST00000385131 88 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 MIR514A3-201ENST00000385132 88 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 MIR1261-201ENST00000408659 82 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU2-2P-201ENST00000410396 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU2-23P-201ENST00000410545 195 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AL117339.3-201ENST00000418733 162 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC027124.2-201ENST00000428249 105 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AL591043.1-201ENST00000432461 424 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC243964.1-201ENST00000441814 261 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AL031274.1-201ENST00000450334 232 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC013470.1-201ENST00000453438 462 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.97□□□□□ -2.09
LCMT2O60294 RPL21P99-201ENST00000480369 423 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RPS29P21-201ENST00000496272 170 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 SNORA14.1-201ENST00000516113 141 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU6-189P-201ENST00000516120 101 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU2-53P-201ENST00000516257 147 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNA5SP137-201ENST00000516833 135 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.97□□□□□ -2.09
LCMT2O60294 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
LCMT2O60294 AC103996.1-201ENST00000555468 102 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 TPRKBP2-201ENST00000565969 475 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC002984.1-201ENST00000591692 448 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC078899.2-201ENST00000595282 212 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.97□□□□□ -2.09
LCMT2O60294 AC092747.3-201ENST00000603769 301 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 Z82243.1-201ENST00000609432 473 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.15-201ENST00000611544 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.16-201ENST00000613119 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.12-201ENST00000613778 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.20-201ENST00000613956 192 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.9-201ENST00000615427 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.11-201ENST00000616345 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.2-201ENST00000616535 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.3-201ENST00000617785 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.19-201ENST00000618602 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 RNU2-1-201ENST00000618664 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC103705.1-201ENST00000619013 241 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.6-201ENST00000619225 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.5-201ENST00000619465 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 U2.10-201ENST00000620268 191 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 AC139792.2-201ENST00000624218 587 ntBASIC1.97□□□□□ -2.09
LCMT2O60294 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LCMT2O60294 AP006437.1-201ENST00000641440 3685 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 RNU6-692P-201ENST00000384496 107 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 MIR544A-201ENST00000384855 91 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 SNORD73A-201ENST00000386062 65 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 HMGN2P39-201ENST00000398005 273 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 RNU6-293P-201ENST00000411259 106 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.96□□□□□ -2.1
LCMT2O60294 MTND3P21-201ENST00000433774 331 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.96□□□□□ -2.1
LCMT2O60294 AL121594.1-201ENST00000475906 575 ntBASIC1.96□□□□□ -2.1
LCMT2O60294 AC018868.1-201ENST00000491307 315 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms