Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.03□□□□□ -1.76
SMARCA5O60264 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMARCA5O60264 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMARCA5O60264 RNU6-858P-201ENST00000362436 107 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 RNY1P16-201ENST00000363063 111 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 Y_RNA.105-201ENST00000363182 111 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 RNU6-790P-201ENST00000384479 105 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 Y_RNA.562-201ENST00000384695 113 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 MTCO3P8-201ENST00000453691 755 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 RNU6-1023P-201ENST00000516137 106 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 Y_RNA.673-201ENST00000516306 88 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.03□□□□□ -1.76
SMARCA5O60264 TRAV32-201ENST00000553993 340 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 OR1M4P-201ENST00000589199 287 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 MIR1244-1-201ENST00000612829 85 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 MIR1244-3-201ENST00000635744 85 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 MIR1244-2-201ENST00000636449 85 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 MIR1244-4-202ENST00000636813 85 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.03□□□□□ -1.76
SMARCA5O60264 FAM35CP-201ENST00000554755 2470 ntBASIC4.03□□□□□ -1.76
SMARCA5O60264 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
SMARCA5O60264 Z83843.1-201ENST00000604070 3685 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 SNORA68.1-201ENST00000364537 132 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 RNVU1-14-201ENST00000384770 164 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 MIR23B-201ENST00000384832 97 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.02□□□□□ -1.77
SMARCA5O60264 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMARCA5O60264 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMARCA5O60264 AC025465.3-201ENST00000510570 311 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.02□□□□□ -1.77
SMARCA5O60264 RNU1-143P-201ENST00000516296 146 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 AC104027.1-201ENST00000521887 300 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.02□□□□□ -1.77
SMARCA5O60264 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.02□□□□□ -1.77
SMARCA5O60264 AC008739.3-201ENST00000603262 127 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 AL121917.1-203ENST00000605534 577 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 AC069200.1-201ENST00000609511 323 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 U1.23-201ENST00000610293 146 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 AL591516.1-201ENST00000611326 274 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 RNU1-68P-201ENST00000615382 146 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 U1.39-201ENST00000621562 146 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 U4.7-201ENST00000638126 106 ntBASIC4.02□□□□□ -1.77
SMARCA5O60264 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SMARCA5O60264 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMARCA5O60264 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMARCA5O60264 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SMARCA5O60264 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMARCA5O60264 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMARCA5O60264 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMARCA5O60264 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.01□□□□□ -1.77
SMARCA5O60264 Y_RNA.19-201ENST00000362462 99 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 RNU6-78P-201ENST00000362897 107 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 RNU6-843P-201ENST00000384454 104 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 Y_RNA.533-201ENST00000384596 114 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 Y_RNA.551-201ENST00000384661 102 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 AL357075.1-201ENST00000404107 726 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.01□□□□□ -1.77
SMARCA5O60264 CST9LP2-201ENST00000437612 320 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 DAP3P1-201ENST00000441522 278 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 AC124916.1-201ENST00000444020 547 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 FCF1P4-201ENST00000448326 183 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMARCA5O60264 MTND4LP30-201ENST00000454092 297 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 AC093852.1-201ENST00000503587 266 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 RNU6-570P-201ENST00000517051 105 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.01□□□□□ -1.77
SMARCA5O60264 AC010186.2-204ENST00000537668 439 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 MIR2682-201ENST00000580305 110 ntBASIC4.01□□□□□ -1.77
SMARCA5O60264 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMARCA5O60264 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SMARCA5O60264 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-37P-201ENST00000362692 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-770P-201ENST00000363929 105 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-11P-201ENST00000364234 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-7-201ENST00000364784 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 SNORA20.1-201ENST00000364790 130 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-8-201ENST00000365467 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-25P-201ENST00000383873 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-1-201ENST00000383898 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-1062P-201ENST00000383908 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-48P-201ENST00000384161 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-36P-201ENST00000384172 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-4P-201ENST00000384205 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-5P-201ENST00000384238 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-3P-201ENST00000384314 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-16P-201ENST00000384385 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-15P-201ENST00000384534 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-2-201ENST00000384627 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-29P-201ENST00000384637 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-9-201ENST00000384776 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-33P-201ENST00000384793 107 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNA5SP44-201ENST00000410446 133 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-121P-201ENST00000410525 99 ntBASIC4□□□□□ -1.77
SMARCA5O60264 SNORD56-201ENST00000413522 71 ntBASIC4□□□□□ -1.77
SMARCA5O60264 AL513043.1-201ENST00000439124 535 ntBASIC4□□□□□ -1.77
SMARCA5O60264 AC091179.1-201ENST00000461606 579 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RPL23AP45-201ENST00000476406 468 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RPS4XP22-201ENST00000480755 780 ntBASIC4□□□□□ -1.77
SMARCA5O60264 RNU6-377P-201ENST00000515965 102 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms