Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.06□□□□□ -1.92
PHGDHO43175 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.06□□□□□ -1.92
PHGDHO43175 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AL118496.2-201ENST00000448300 230 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AC090525.1-201ENST00000479116 478 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AIG1P1-201ENST00000503376 148 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AC110794.1-201ENST00000505816 425 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 RNU6-976P-201ENST00000516086 111 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 RNU2-53P-201ENST00000516257 147 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.06□□□□□ -1.92
PHGDHO43175 AL590705.4-201ENST00000532209 134 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AC021231.3-201ENST00000558497 370 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
PHGDHO43175 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.06□□□□□ -1.92
PHGDHO43175 uc_338.22-201ENST00000622722 187 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 AC134503.1-201ENST00000633048 54 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 SNORD98-201ENST00000636377 67 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 U6.105-201ENST00000637379 88 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.06□□□□□ -1.92
PHGDHO43175 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
PHGDHO43175 RNU6-1115P-201ENST00000362490 106 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RNU6-655P-201ENST00000362858 107 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 Y_RNA.128-201ENST00000363391 112 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RNU6-1210P-201ENST00000363775 107 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 SNORA36A-201ENST00000384221 132 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 Y_RNA.463-201ENST00000384271 102 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RNA5SP171-201ENST00000391071 115 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RNU6-1328P-201ENST00000410938 106 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 TRIAP1P1-201ENST00000427062 225 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 snoU13.14-201ENST00000459372 104 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RN7SL863P-201ENST00000462370 296 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 AL121594.1-201ENST00000475906 575 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RPL30P1-201ENST00000488676 339 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.05□□□□□ -1.92
PHGDHO43175 RNU5F-2P-201ENST00000516066 82 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 SNORA31.16-201ENST00000516773 139 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 RNU6-699P-201ENST00000517081 110 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.05□□□□□ -1.92
PHGDHO43175 AP000889.1-201ENST00000530968 660 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.05□□□□□ -1.92
PHGDHO43175 ELOCP31-201ENST00000540463 467 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 MIR5571-201ENST00000577998 113 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 MIR3136-201ENST00000583498 78 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 UBL5P2-201ENST00000583788 219 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 AC022432.1-201ENST00000595739 310 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 SNRPGP17-201ENST00000603780 214 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.05□□□□□ -1.92
PHGDHO43175 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PHGDHO43175 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PHGDHO43175 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PHGDHO43175 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHGDHO43175 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHGDHO43175 Y_RNA.5-201ENST00000362334 102 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 RNU4-56P-201ENST00000364700 142 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 RNU6-99P-201ENST00000364721 107 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 RNU4-9P-201ENST00000364951 139 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.04□□□□□ -1.92
PHGDHO43175 Y_RNA.395-201ENST00000383945 109 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 MIR183-201ENST00000384958 110 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 MIR218-1-201ENST00000384999 110 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 U3.19-201ENST00000390893 196 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 RNU6-700P-201ENST00000391043 107 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 MIR548P-201ENST00000408336 84 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 RNA5SP494-201ENST00000410653 129 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 AL358453.1-201ENST00000422522 250 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 EIF4EP4-201ENST00000424916 578 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 AC008267.5-201ENST00000424928 265 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.04□□□□□ -1.92
PHGDHO43175 Y_RNA.631-201ENST00000459607 101 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 AC091153.1-201ENST00000466297 402 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.04□□□□□ -1.92
PHGDHO43175 RPL23AP75-201ENST00000491601 451 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 Y_RNA.661-201ENST00000516003 99 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.04□□□□□ -1.92
PHGDHO43175 SUB1P3-201ENST00000564581 315 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.04□□□□□ -1.92
PHGDHO43175 MIR3199-1-201ENST00000582434 88 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.04□□□□□ -1.92
PHGDHO43175 SCARNA4-201ENST00000629045 128 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHGDHO43175 AL079305.1-201ENST00000623159 3008 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHGDHO43175 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
PHGDHO43175 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
PHGDHO43175 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PHGDHO43175 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
PHGDHO43175 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
PHGDHO43175 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PHGDHO43175 AC073325.2-201ENST00000339545 159 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 SNORA63-201ENST00000363450 132 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 SNORA7.4-201ENST00000384249 137 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 SNORD15B-201ENST00000384714 146 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 MIR34B-201ENST00000385076 84 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 SNORA26.3-201ENST00000391119 136 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 PMCHL1-202ENST00000423102 261 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AIMP1P2-201ENST00000425294 312 ntBASIC3.03□□□□□ -1.92
PHGDHO43175 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.03□□□□□ -1.92
PHGDHO43175 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.03□□□□□ -1.92
PHGDHO43175 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.03□□□□□ -1.92
PHGDHO43175 RN7SKP210-201ENST00000459176 261 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms