Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR514A3-201ENST00000385132 88 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 MIR524-201ENST00000385242 87 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.84□□□□□ -1.95
NPHP1O15259 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.84□□□□□ -1.95
NPHP1O15259 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.84□□□□□ -1.95
NPHP1O15259 MTND3P16-201ENST00000452205 344 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 RNU7-138P-201ENST00000459479 64 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.84□□□□□ -1.95
NPHP1O15259 AC091885.1-201ENST00000506658 268 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 AK3P2-201ENST00000507976 429 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.84□□□□□ -1.95
NPHP1O15259 AC092747.3-201ENST00000603769 301 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 AC067747.1-201ENST00000608026 250 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 MIR6132-201ENST00000622083 109 ntBASIC2.84□□□□□ -1.95
NPHP1O15259 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP1O15259 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NPHP1O15259 snoU2_19.1-201ENST00000362361 80 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 SNORA67.3-201ENST00000384366 140 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NPHP1O15259 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NPHP1O15259 AL079342.1-201ENST00000401460 267 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.83□□□□□ -1.96
NPHP1O15259 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP1O15259 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP1O15259 USP9YP18-201ENST00000425912 695 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AL589823.1-201ENST00000429577 183 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 SNAP23P1-201ENST00000433229 246 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP1O15259 Y_RNA.654-201ENST00000497848 106 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AC107222.1-201ENST00000510899 637 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 RNU5F-2P-201ENST00000516066 82 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 RNA5SP458-201ENST00000516188 119 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 RNU6-506P-201ENST00000516553 94 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.83□□□□□ -1.96
NPHP1O15259 AC115990.1-201ENST00000526957 301 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AK6P1-201ENST00000540219 478 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP1O15259 AC060766.3-201ENST00000591442 263 ntBASIC2.83□□□□□ -1.96
NPHP1O15259 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.83□□□□□ -1.96
NPHP1O15259 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NPHP1O15259 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NPHP1O15259 RNU6-944P-201ENST00000364023 107 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 Y_RNA.372-201ENST00000365599 102 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP1O15259 RNU6-43P-201ENST00000384302 107 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 MIR29B2-201ENST00000385055 81 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 EDDM3CP-201ENST00000415977 425 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 MTND3P21-201ENST00000433774 331 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NPHP1O15259 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.82□□□□□ -1.96
NPHP1O15259 SNORA4.4-201ENST00000515921 135 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 RNU6-1069P-201ENST00000516612 133 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 RNU7-193P-201ENST00000516723 65 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 RNA5SP402-201ENST00000517148 110 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 AC034114.1-201ENST00000520293 285 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.82□□□□□ -1.96
NPHP1O15259 MYL12BP1-201ENST00000569826 507 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 AC009314.1-201ENST00000603871 304 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 ELOCP5-201ENST00000604924 333 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 AC092807.2-201ENST00000609367 243 ntBASIC2.82□□□□□ -1.96
NPHP1O15259 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPHP1O15259 RNU6-1141P-201ENST00000364520 107 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 RNU6-483P-201ENST00000384088 108 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 SNORD73A-201ENST00000386062 65 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 RPS15AP10-201ENST00000432472 382 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.81□□□□□ -1.96
NPHP1O15259 SEPT14P3-201ENST00000439401 183 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.81□□□□□ -1.96
NPHP1O15259 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.81□□□□□ -1.96
NPHP1O15259 AL732372.2-207ENST00000445840 183 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 SEPT14P2-201ENST00000453405 183 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 SEPT14P4-201ENST00000513445 186 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 Y_RNA.704-201ENST00000516851 102 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 FO082796.1-201ENST00000523795 183 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 AC233702.2-202ENST00000562547 291 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 MIR3126-201ENST00000577443 74 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.81□□□□□ -1.96
NPHP1O15259 AL162413.1-201ENST00000603198 110 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 YWHAEP7-203ENST00000622054 312 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 MIR219B-201ENST00000637023 88 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 AC068137.3-201ENST00000639191 341 ntBASIC2.81□□□□□ -1.96
NPHP1O15259 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.81□□□□□ -1.96
NPHP1O15259 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NPHP1O15259 AL356292.1-201ENST00000283110 373 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 RNU6-1159P-201ENST00000362933 107 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 Y_RNA.167-201ENST00000363735 109 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 SNORD32A-201ENST00000364805 84 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP1O15259 RNU2-48P-201ENST00000410694 191 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 RNU6-1068P-201ENST00000410958 103 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPHP1O15259 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.8□□□□□ -1.96
NPHP1O15259 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP1O15259 AC011753.1-201ENST00000451001 220 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.8□□□□□ -1.96
NPHP1O15259 RNU6-1208P-201ENST00000459588 107 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 RNU6-1281P-201ENST00000516223 105 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 SNORD60.2-201ENST00000516883 86 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms