Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MTND1P20-201ENST00000430341 950 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 snoU13.30-201ENST00000458951 104 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 TRMT112P2-201ENST00000512910 132 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 RNU7-40P-201ENST00000516397 64 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 CBX3P8-201ENST00000532412 525 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.74□□□□□ -2.29
SDCBPO00560 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.74□□□□□ -2.29
SDCBPO00560 ADI1P3-201ENST00000549509 470 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 MIR4498-201ENST00000577599 66 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 MIR3937-201ENST00000580135 106 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.74□□□□□ -2.29
SDCBPO00560 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.74□□□□□ -2.29
SDCBPO00560 AC073539.2-201ENST00000597113 165 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AC090578.1-201ENST00000604955 591 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AL355802.3-201ENST00000607571 545 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AC026585.1-201ENST00000619582 524 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 Y_RNA.302-201ENST00000364997 102 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 Y_RNA.338-201ENST00000365320 114 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 SNORA24.1-201ENST00000384401 135 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 RNU6-360P-201ENST00000390944 104 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 RNU2-3P-201ENST00000410144 191 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.73□□□□□ -2.29
SDCBPO00560 AC006366.1-201ENST00000422002 759 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 MTND4P20-201ENST00000424125 869 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 MTND5P2-201ENST00000442927 1142 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 EXOSC3P1-201ENST00000448649 500 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.73□□□□□ -2.29
SDCBPO00560 RPL9P9-202ENST00000466501 579 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 HMGN1P7-201ENST00000491722 313 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.73□□□□□ -2.29
SDCBPO00560 AC005840.1-201ENST00000498412 377 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 MTND3P25-201ENST00000509243 135 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.73□□□□□ -2.29
SDCBPO00560 AC116347.2-201ENST00000514912 523 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AC105185.1-201ENST00000518705 535 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.73□□□□□ -2.29
SDCBPO00560 RAB11AP2-201ENST00000545905 639 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.73□□□□□ -2.29
SDCBPO00560 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.73□□□□□ -2.29
SDCBPO00560 AC110760.3-201ENST00000598794 467 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AL034555.1-201ENST00000604816 211 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AC121334.2-201ENST00000605387 271 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AC009033.1-201ENST00000624279 431 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 AC103706.2-201ENST00000638080 240 ntBASIC0.73□□□□□ -2.29
SDCBPO00560 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SDCBPO00560 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.72□□□□□ -2.29
SDCBPO00560 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.72□□□□□ -2.29
SDCBPO00560 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SDCBPO00560 RNU6-931P-201ENST00000363850 107 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 RNU6-1222P-201ENST00000384615 107 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.72□□□□□ -2.29
SDCBPO00560 AL590556.1-201ENST00000423231 483 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.72□□□□□ -2.29
SDCBPO00560 RNA5SP269-201ENST00000459032 137 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 TOMM22P6-201ENST00000465035 409 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.72□□□□□ -2.29
SDCBPO00560 ARL2BPP4-201ENST00000506854 471 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.72□□□□□ -2.29
SDCBPO00560 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.72□□□□□ -2.29
SDCBPO00560 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC011979.2-201ENST00000527568 352 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.72□□□□□ -2.29
SDCBPO00560 HMGB1P33-201ENST00000563485 527 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC008521.1-201ENST00000587471 187 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AL590229.1-201ENST00000603497 542 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC012507.3-201ENST00000603556 477 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC112187.2-201ENST00000604345 283 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 BNIP3P31-201ENST00000604515 566 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC004492.1-201ENST00000607036 742 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AL451064.1-201ENST00000607718 471 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.72□□□□□ -2.29
SDCBPO00560 AC097478.2-201ENST00000610572 514 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 RMST_4.1-201ENST00000616886 107 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AC104010.1-201ENST00000616889 150 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 AL157786.1-207ENST00000627771 695 ntBASIC0.72□□□□□ -2.29
SDCBPO00560 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SDCBPO00560 AC073343.1-201ENST00000328239 651 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 RNU6-862P-201ENST00000362804 105 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 RNU6-660P-201ENST00000364566 109 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 RNU5E-7P-201ENST00000365290 117 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 RNU6-157P-201ENST00000383957 107 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 MIR520A-201ENST00000384862 85 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 MIR194-1-201ENST00000384892 85 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 AL356776.1-201ENST00000406574 447 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 RNU6-321P-201ENST00000410912 106 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 CYCSP33-201ENST00000414485 327 ntBASIC0.71□□□□□ -2.3
SDCBPO00560 EIF1P1-201ENST00000421436 341 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms