Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Z69720.2-201ENST00000624755 279 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1AO00322 U4.7-201ENST00000638126 106 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UPK1AO00322 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1AO00322 RNU6-105P-201ENST00000363909 104 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 RNU4-56P-201ENST00000364700 142 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 SNORD115-7-201ENST00000365306 82 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1AO00322 RNU6-45P-201ENST00000384471 107 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 RNU2-3P-201ENST00000410144 191 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC073614.1-201ENST00000438690 650 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC145146.1-201ENST00000496370 254 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC022447.4-201ENST00000504053 364 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC104136.1-201ENST00000512969 394 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 MIR449C-201ENST00000516047 92 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1AO00322 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.2□□□□□ -2.22
UPK1AO00322 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.2□□□□□ -2.22
UPK1AO00322 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1AO00322 AC008269.2-201ENST00000561915 1105 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1AO00322 MIR3136-201ENST00000583498 78 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 AC104984.5-201ENST00000586878 94 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 BNIP3P8-201ENST00000597863 560 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.2□□□□□ -2.22
UPK1AO00322 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1AO00322 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK1AO00322 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
UPK1AO00322 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UPK1AO00322 MTND5P17-201ENST00000418405 1603 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UPK1AO00322 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-37P-201ENST00000362692 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-11P-201ENST00000364234 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNY4P34-201ENST00000364779 95 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 Y_RNA.324-201ENST00000365165 102 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-169P-201ENST00000365336 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-25P-201ENST00000383873 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-1-201ENST00000383898 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-48P-201ENST00000384161 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-36P-201ENST00000384172 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-4P-201ENST00000384205 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-5P-201ENST00000384238 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-3P-201ENST00000384314 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-16P-201ENST00000384385 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-15P-201ENST00000384534 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-2-201ENST00000384627 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-29P-201ENST00000384637 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-9-201ENST00000384776 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-33P-201ENST00000384793 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
UPK1AO00322 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 SNORA12-201ENST00000391162 147 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 CYCSP33-201ENST00000414485 327 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 AC011233.1-201ENST00000422812 283 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.19□□□□□ -2.22
UPK1AO00322 TAF9P1-201ENST00000445421 515 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 ART2BP-201ENST00000453501 499 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 TAF9P2-201ENST00000454958 515 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 SNRPFP4-201ENST00000456366 242 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.19□□□□□ -2.22
UPK1AO00322 AC005741.1-201ENST00000511094 432 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-410P-201ENST00000517006 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU2-46P-201ENST00000517038 113 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 MRPS36P3-201ENST00000519284 130 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK1AO00322 MIR3169-201ENST00000578032 83 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 MIR3682-201ENST00000581338 84 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 AC098848.2-201ENST00000588023 330 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 AC005786.1-201ENST00000588553 154 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 PRR13P7-201ENST00000605538 430 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 RNU6-6P-201ENST00000606623 107 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
UPK1AO00322 AC004223.4-201ENST00000612426 332 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 MIR8074-201ENST00000615081 81 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 SNORD98-201ENST00000636377 67 ntBASIC1.19□□□□□ -2.22
UPK1AO00322 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 RNU6-1285P-201ENST00000363480 105 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 RNU6-338P-201ENST00000383888 105 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 RNU6-26P-201ENST00000383985 107 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 RNU6-550P-201ENST00000391057 101 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 RNU6-293P-201ENST00000411259 106 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1AO00322 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK1AO00322 MTND1P30-201ENST00000441241 901 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AC079448.1-201ENST00000449377 373 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 GAPDHP17-201ENST00000449858 1001 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 HMGN2P18-201ENST00000450680 270 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 FABP5P5-201ENST00000515537 406 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 RNU6-1178P-201ENST00000516674 107 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 SNORA31.17-201ENST00000516953 127 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AC109479.2-201ENST00000517842 174 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK1AO00322 BNIP3P39-201ENST00000601077 554 ntBASIC1.18□□□□□ -2.22
UPK1AO00322 AL590229.1-201ENST00000603497 542 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms