Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 SNORA31.25-201ENST00000517242 134 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC087883.1-201ENST00000551882 391 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC012435.1-202ENST00000568772 240 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC069294.1-201ENST00000608397 350 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 U6.42-201ENST00000618440 107 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC091932.3-201ENST00000624223 323 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 Z99571.1-201ENST00000636677 394 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC008555.8-201ENST00000623602 2168 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 snoU2_19.1-201ENST00000362361 80 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.77-201ENST00000362962 107 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 SNORD14B-201ENST00000364533 90 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU6-61P-201ENST00000365528 109 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1103P-201ENST00000384150 107 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU6-35P-201ENST00000384530 107 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1235P-201ENST00000384559 107 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 MIR1-2-201ENST00000384961 85 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 MTCYBP36-201ENST00000404146 440 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.623-201ENST00000411128 95 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNA5SP111-201ENST00000411386 101 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 VN1R36P-201ENST00000414936 291 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RPL21P90-201ENST00000415692 466 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 PTGES3P4-201ENST00000426243 356 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU1-98P-201ENST00000458992 160 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU6-498P-201ENST00000459468 107 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 MTCO3P9-201ENST00000506989 781 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC074344.1-201ENST00000512823 224 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU5F-2P-201ENST00000516066 82 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.672-201ENST00000516289 104 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 RNU6-410P-201ENST00000517006 107 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 OR1M4P-201ENST00000589199 287 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AL353778.1-201ENST00000603149 408 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC105148.1-201ENST00000604961 409 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC022893.3-201ENST00000607665 437 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 MIR5739-201ENST00000619803 80 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC091925.1-201ENST00000623204 462 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 AC009161.2-201ENST00000624626 138 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 MTND5P42-201ENST00000637720 498 ntBASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL6A6A6NMZ7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC138393.1-203ENST00000327086 343 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-181P-201ENST00000363225 107 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.303-201ENST00000364998 94 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-517P-201ENST00000384362 110 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 BTF3L4P3-201ENST00000418879 476 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 MTND1P28-201ENST00000435623 950 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AL161788.1-201ENST00000441805 169 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 HMGN2P10-201ENST00000448085 265 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC003071.1-201ENST00000451219 789 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AL033528.1-201ENST00000453780 140 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC006512.1-201ENST00000468816 291 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 HMGB3P17-201ENST00000504195 649 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-572P-201ENST00000516724 80 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-677P-201ENST00000516914 101 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-445P-201ENST00000516949 107 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 MTATP6P15-201ENST00000527233 835 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC090888.1-201ENST00000561335 1141 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC093249.1-201ENST00000567049 203 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC137800.2-201ENST00000574375 120 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC073544.2-201ENST00000601155 540 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 BNIP3P30-201ENST00000601184 574 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC009233.1-201ENST00000616477 371 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.33-201ENST00000362591 102 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-78P-201ENST00000362897 107 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 SNORD56.2-201ENST00000363242 71 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-931P-201ENST00000363850 107 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU5E-5P-201ENST00000365379 116 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1029P-201ENST00000384109 107 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-611P-201ENST00000384276 104 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-750P-201ENST00000390946 107 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RPS3AP3-201ENST00000411933 242 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC114491.1-201ENST00000416095 246 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 MTATP6P16-201ENST00000434543 526 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AL353752.1-201ENST00000454946 260 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 MTND1P12-201ENST00000455231 147 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC018437.1-201ENST00000492214 406 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC112204.1-201ENST00000502591 103 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms