Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 RNU1-112P-201ENST00000364401 164 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 U8.8-201ENST00000365399 135 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 RNU6-310P-201ENST00000384655 107 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 SNORA67.4-201ENST00000384688 142 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 USMG5P1-201ENST00000425964 177 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 MTND1P14-201ENST00000427400 950 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 snoU13.26-201ENST00000459452 105 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 RAC1P5-201ENST00000512182 576 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 MIR4524B-201ENST00000581569 115 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AP001836.1-201ENST00000604675 523 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 UCA1.1-201ENST00000620952 75 ntBASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM43BA6NCK2 AP003122.5-201ENST00000527668 3766 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.146-201ENST00000363549 102 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RNU6-692P-201ENST00000384496 107 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 MIR504-201ENST00000385065 83 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 Y_RNA.646-201ENST00000410980 101 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AP000275.1-201ENST00000411943 390 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RPL23AP50-201ENST00000434149 455 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC243964.1-201ENST00000441814 261 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 OSTCP8-201ENST00000445117 448 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RPS3P1-201ENST00000456781 192 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC097473.1-201ENST00000508142 408 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC005899.2-201ENST00000584353 90 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC078795.3-201ENST00000602913 472 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 AC080078.3-201ENST00000605407 463 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 RNU6-91P-201ENST00000607774 107 ntBASIC3.16□□□□□ -1.9
TRIM43BA6NCK2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.15□□□□□ -1.9
TRIM43BA6NCK2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM43BA6NCK2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
TRIM43BA6NCK2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
TRIM43BA6NCK2 MTND5P10-201ENST00000603719 1809 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 RNA5SP68-201ENST00000363885 119 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 RNU6-842P-201ENST00000384269 107 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 MIR544A-201ENST00000384855 91 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 Y_RNA.579-201ENST00000390939 94 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AL591034.2-201ENST00000402839 359 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 RNA5SP390-201ENST00000410191 113 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AF228730.4-201ENST00000421457 183 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AC007969.2-201ENST00000441891 191 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 ELOCP24-201ENST00000456370 334 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 RNU7-152P-201ENST00000458982 64 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 CKS1BP7-201ENST00000522230 235 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 MTCO3P13-201ENST00000577757 781 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AC096772.1-201ENST00000609146 564 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AC090971.5-201ENST00000621102 293 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 AC064859.1-201ENST00000624741 174 ntBASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TRIM43BA6NCK2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC099654.7-201ENST00000635788 2127 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 Y_RNA.187-201ENST00000363918 113 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 Y_RNA.404-201ENST00000383978 102 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 RNU6-43P-201ENST00000384302 107 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 RNU6-1011P-201ENST00000384668 107 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC138623.1-201ENST00000418060 216 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC104332.2-201ENST00000429959 156 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 MTCO3P10-201ENST00000455912 772 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AP001025.1-201ENST00000486139 332 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC093303.1-201ENST00000514549 295 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 RNA5SP24-201ENST00000516478 95 ntBASIC3.14□□□□□ -1.91
TRIM43BA6NCK2 AC105137.2-201ENST00000569073 466 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms