Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-946P-201ENST00000383878 107 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-769P-201ENST00000384407 104 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-1065P-201ENST00000384513 106 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR515-2-201ENST00000384883 83 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR515-1-201ENST00000384884 83 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR194-1-201ENST00000384892 85 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 BTF3L4P1-201ENST00000413813 468 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 ELOCP17-201ENST00000414751 326 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 ELOCP9-201ENST00000418624 239 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 PGBD4P5-201ENST00000445958 426 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 snoU13.30-201ENST00000458951 104 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 HMGN2P9-201ENST00000476875 229 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MTND2P33-201ENST00000506452 1031 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC092436.3-201ENST00000511788 257 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNA5SP216-201ENST00000516111 123 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL590229.1-201ENST00000603497 542 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL365434.2-201ENST00000607979 234 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RMST_4.1-201ENST00000616886 107 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR8065-201ENST00000620577 100 ntBASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.6□□□□□ -2.31
TCRBV4S1A1TA0A5B7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-384P-201ENST00000364900 104 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNY3P13-201ENST00000365542 102 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU5E-6P-201ENST00000365574 115 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-968P-201ENST00000384076 107 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SNORA25-201ENST00000384384 134 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC123900.1-201ENST00000420390 96 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL590556.1-201ENST00000423231 483 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 TXNL1P1-201ENST00000429528 554 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL445305.1-201ENST00000432577 575 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC134050.1-201ENST00000495088 933 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU5A-4P-201ENST00000516588 111 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 Y_RNA.689-201ENST00000516589 107 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC069114.2-201ENST00000604699 304 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 BX284668.6-201ENST00000606899 438 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC108747.1-201ENST00000609508 535 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC091948.2-201ENST00000636510 279 ntBASIC0.59□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNORA63D-201ENST00000364359 132 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RPS3AP36-201ENST00000398190 775 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL356776.1-201ENST00000406574 447 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RAP1BP3-201ENST00000407180 549 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 EBAG9P1-201ENST00000418955 543 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC007969.2-201ENST00000441891 191 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC132479.1-201ENST00000449160 144 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 ART2BP-201ENST00000453501 499 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MTCO3P9-201ENST00000506989 781 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC005741.1-201ENST00000511094 432 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC109445.1-201ENST00000512356 383 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU5F-2P-201ENST00000516066 82 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SUMO2P18-201ENST00000518873 252 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR544B-201ENST00000582372 78 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC174048.1-201ENST00000603389 144 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL022345.2-201ENST00000606307 135 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.58□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC010615.1-201ENST00000594254 1764 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC245060.5-201ENST00000610778 3293 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU4-15P-201ENST00000362613 141 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 Y_RNA.112-201ENST00000363250 102 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNORA29-201ENST00000384183 140 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 Y_RNA.472-201ENST00000384322 102 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-331P-201ENST00000384724 107 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU2-7P-201ENST00000410794 178 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNX2P2-201ENST00000424553 323 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MTND5P15-201ENST00000434246 349 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL008629.1-201ENST00000438615 184 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-1132P-201ENST00000459214 107 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC092991.1-201ENST00000477176 376 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RN7SKP88-201ENST00000516847 250 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms