Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ZFAND6P1-201ENST00000434138 605 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AC121161.1-201ENST00000510606 652 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU5F-2P-201ENST00000516066 82 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNY4P37-201ENST00000516225 96 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 DEFB131D-201ENST00000526803 184 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 MIR4709-201ENST00000577272 72 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AC091135.1-201ENST00000585943 307 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AL136363.2-201ENST00000604173 851 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 AC023158.2-201ENST00000614876 543 ntBASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.19□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-853P-201ENST00000364306 107 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 MTCO3P41-201ENST00000414801 328 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 MTCO1P21-201ENST00000416634 589 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 COX6CP10-201ENST00000416832 224 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AL590556.1-201ENST00000423231 483 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 RPL23AP95-201ENST00000426806 265 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 ZNF886P-201ENST00000450781 723 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 SNRPFP3-201ENST00000457792 225 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC113410.1-201ENST00000505029 247 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC091435.1-201ENST00000505442 584 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 SNORA43.2-201ENST00000516652 128 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC021451.1-201ENST00000523498 1129 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 MTCO3P15-201ENST00000526563 574 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 MIR5695-201ENST00000579717 85 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 KC877982.1-201ENST00000602313 470 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 OR4H6P-202ENST00000603819 340 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC090186.1-201ENST00000605991 572 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC022893.3-201ENST00000607665 437 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
TCRBV3S1A0A5B6 AL442644.1-201ENST00000454390 3105 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-777P-201ENST00000364265 104 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 AL158053.1-201ENST00000441503 453 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 ART2BP-201ENST00000453501 499 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-953P-201ENST00000459154 107 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 MTND2P33-201ENST00000506452 1031 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 RNA5SP458-201ENST00000516188 119 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 AC018889.1-201ENST00000605372 397 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 MIR8084-201ENST00000614105 89 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 AC005858.4-201ENST00000623191 700 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 PCMTD1P7-201ENST00000634506 357 ntBASIC0.17□□□□□ -2.38
TCRBV3S1A0A5B6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 SNORD56.1-201ENST00000362913 68 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 SNORA80D-201ENST00000384488 135 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AL591212.2-201ENST00000433923 257 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AC069257.2-201ENST00000441819 155 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 EEF1E1P1-201ENST00000446998 430 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AC010587.2-201ENST00000511727 448 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AP003355.1-201ENST00000518956 587 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 APOOP3-201ENST00000536787 586 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 MIR4498-201ENST00000577599 66 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 MIR4524B-201ENST00000581569 115 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 MIR3136-201ENST00000583498 78 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AC243829.6-201ENST00000612652 106 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 OR4G1P-203ENST00000641984 1631 ntBASIC0.16□□□□□ -2.38
TCRBV3S1A0A5B6 OR4G2P-201ENST00000328113 903 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-395P-201ENST00000365662 106 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC092423.1-201ENST00000430165 186 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AL627311.1-201ENST00000431514 115 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC007969.2-201ENST00000441891 191 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AL139824.2-201ENST00000458731 1095 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC092991.1-201ENST00000477176 376 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 TPRKBP2-201ENST00000565969 475 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 MIR5708-201ENST00000579723 85 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms