Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC046134.1-201ENST00000514454 666 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU2-53P-201ENST00000516257 147 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-612P-201ENST00000516909 102 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC118273.2-201ENST00000532092 465 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 GTF3AP2-201ENST00000557014 266 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 MIR5571-201ENST00000577998 113 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL713866.2-201ENST00000603579 219 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL161756.2-201ENST00000604597 246 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL033523.1-201ENST00000605153 153 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL022345.1-201ENST00000607292 135 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC009233.1-201ENST00000616477 371 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC092608.2-201ENST00000624427 218 ntBASIC2.18□□□□□ -2.06
TRBV4-1A0A0J9YWV2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AP000560.1-201ENST00000624150 1937 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-655P-201ENST00000362858 107 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-1317P-201ENST00000364582 104 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-767P-201ENST00000384132 107 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 SNORA48.2-201ENST00000390926 124 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 CBX3P9-201ENST00000402326 552 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL359511.1-201ENST00000402970 211 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RN7SKP61-201ENST00000410642 295 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-325P-201ENST00000411132 105 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC003685.2-201ENST00000422795 395 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 USP9YP8-201ENST00000441913 500 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU7-187P-201ENST00000458985 68 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 U8.21-201ENST00000459536 136 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-566P-201ENST00000516790 107 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNA5SP454-201ENST00000517231 127 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC026464.5-201ENST00000562497 722 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC023824.2-201ENST00000566185 400 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 MIR4446-201ENST00000578505 67 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL133215.3-201ENST00000609801 448 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC022306.2-201ENST00000617563 647 ntBASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRBV4-1A0A0J9YWV2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC131280.1-202ENST00000624067 4211 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 CBX3P1-201ENST00000325243 554 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-212P-201ENST00000362642 104 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU6-227P-201ENST00000362865 103 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 Y_RNA.166-201ENST00000363730 102 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL133396.1-201ENST00000432048 687 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 MTND1P17-201ENST00000448961 204 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC073901.1-201ENST00000462471 408 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC130509.1-201ENST00000464158 433 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RNU1-104P-201ENST00000517280 175 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC115990.1-201ENST00000526957 301 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 PRELID2P1-201ENST00000552837 301 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RPL30P11-203ENST00000598995 310 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AL133216.2-202ENST00000634512 349 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRBV4-1A0A0J9YWV2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
TRBV4-1A0A0J9YWV2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
TRBV4-1A0A0J9YWV2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RNU6-845P-201ENST00000362578 103 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 Y_RNA.88-201ENST00000363029 99 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MIR95-201ENST00000385072 81 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 SNORA26.3-201ENST00000391119 136 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 RN7SKP32-201ENST00000410167 303 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC063976.3-201ENST00000426849 329 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC078809.1-201ENST00000427601 140 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 PMCHL2-203ENST00000457791 237 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC090515.1-201ENST00000465295 476 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC140059.1-201ENST00000489238 361 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 AC091874.1-201ENST00000511402 339 ntBASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.15□□□□□ -2.07
TRBV4-1A0A0J9YWV2 PTP4A1P4-201ENST00000512479 322 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms