Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC002429.1-201ENST00000437672 148 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 BET1P1-201ENST00000482276 359 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AK3P2-201ENST00000507976 429 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 MIR449C-201ENST00000516047 92 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 SNORD60.2-201ENST00000516883 86 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-143P-201ENST00000516942 93 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AL442163.3-201ENST00000554110 156 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC092325.1-201ENST00000566449 554 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC060771.1-201ENST00000582031 164 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC107304.1-201ENST00000604229 296 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC069114.2-201ENST00000604699 304 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC105148.1-201ENST00000604961 409 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP361-201ENST00000362686 118 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.124-201ENST00000363339 93 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1019P-201ENST00000364424 107 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1122P-201ENST00000384449 107 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 BX664727.1-201ENST00000416024 466 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AL358176.2-201ENST00000425769 204 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 RAB28P5-201ENST00000427490 651 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 MTCO1P3-201ENST00000429327 192 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 TXNL1P1-201ENST00000429528 554 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 LARP1BP3-201ENST00000437229 869 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 RNU7-59P-201ENST00000459101 61 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-64P-201ENST00000517119 105 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AL391001.1-201ENST00000602747 715 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AL451064.1-201ENST00000607718 471 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 AC245060.5-201ENST00000610778 3293 ntBASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TRAV17A0A0B4J275 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 RNU4-79P-201ENST00000362764 141 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 SNORA4.3-201ENST00000365564 137 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-110P-201ENST00000384508 104 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 MIR200A-201ENST00000384875 90 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC063976.4-201ENST00000421971 163 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 SNRPEP7-201ENST00000438350 220 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AL008629.1-201ENST00000438615 184 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 snoU13.30-201ENST00000458951 104 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 snoU13.27-201ENST00000459278 104 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC098869.1-201ENST00000481627 292 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC121161.1-201ENST00000510606 652 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1315P-201ENST00000517187 99 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 SUMO2P18-201ENST00000518873 252 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC104417.1-201ENST00000523974 751 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 Z69720.2-201ENST00000624755 279 ntBASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV17A0A0B4J275 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC068700.1-201ENST00000565862 3754 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-716P-201ENST00000365621 103 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-72P-201ENST00000384285 79 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AL079342.2-201ENST00000403367 482 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RAP1BP3-201ENST00000407180 549 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1025P-201ENST00000410629 104 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU2-7P-201ENST00000410794 178 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1054P-201ENST00000411293 104 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RPS3AP1-201ENST00000413190 320 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 MTCYBP5-201ENST00000423752 1135 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 CETN4P-201ENST00000432407 469 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 ZFAND6P1-201ENST00000434138 605 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC073614.1-201ENST00000438690 650 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1225P-201ENST00000516336 65 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AL121579.1-201ENST00000555129 305 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 MIR1273C-201ENST00000578669 77 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC007363.1-201ENST00000604736 620 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AC023158.2-201ENST00000614876 543 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 RMST_4.1-201ENST00000616886 107 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 MTND5P33-201ENST00000571250 1450 ntBASIC0.32□□□□□ -2.36
TRAV17A0A0B4J275 AL391994.1-201ENST00000254724 282 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-212P-201ENST00000362642 104 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.408-201ENST00000383987 102 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-331P-201ENST00000384724 107 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms