Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 RNU1-63P-201ENST00000383902 164 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 Y_RNA.542-201ENST00000384641 111 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 MIR585-201ENST00000384887 94 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 U3.22-201ENST00000391120 215 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
GPC6Q9Y625 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC008897.1-201ENST00000494006 347 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.22□□□□□ -1.73
GPC6Q9Y625 Y_RNA.686-201ENST00000516548 134 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 RNU7-121P-201ENST00000516604 62 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 RNU6-453P-201ENST00000516819 85 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC136628.3-201ENST00000521868 290 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC109810.1-201ENST00000534066 224 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 AL360157.1-201ENST00000565962 87 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC008873.1-201ENST00000625051 138 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
GPC6Q9Y625 AC068700.1-201ENST00000565862 3754 ntBASIC4.22□□□□□ -1.73
GPC6Q9Y625 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GPC6Q9Y625 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
GPC6Q9Y625 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
GPC6Q9Y625 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 RNA5SP189-201ENST00000364920 115 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 RNA5SP22-201ENST00000365393 109 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 RNU6-487P-201ENST00000365430 104 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 RNU6-969P-201ENST00000383900 105 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 RNU1-44P-201ENST00000384453 163 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 SDHCP2-201ENST00000398565 501 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 AL121914.1-201ENST00000450188 156 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 RPL23AP70-201ENST00000483361 460 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC006445.2-201ENST00000510061 472 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC015795.1-201ENST00000513669 327 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC027176.1-201ENST00000560204 514 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 CYP4A43P-201ENST00000568156 121 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 MIR4644-201ENST00000579929 84 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 MIR5006-201ENST00000583027 110 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC011603.4-201ENST00000611325 277 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 Y_RNA.802-201ENST00000614892 130 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC073073.2-201ENST00000609827 2578 ntBASIC4.21□□□□□ -1.74
GPC6Q9Y625 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC6Q9Y625 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
GPC6Q9Y625 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
GPC6Q9Y625 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
GPC6Q9Y625 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GPC6Q9Y625 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
GPC6Q9Y625 RNU6-270P-201ENST00000364131 105 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 Y_RNA.337-201ENST00000365312 102 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 RNA5SP167-201ENST00000365461 116 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 AC245028.1-201ENST00000423259 256 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.2□□□□□ -1.74
GPC6Q9Y625 AC004386.2-201ENST00000441858 148 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 AC074290.1-201ENST00000448883 135 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 RNA5SP310-201ENST00000459084 116 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.2□□□□□ -1.74
GPC6Q9Y625 AC112693.2-201ENST00000556538 232 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 RPL23AP97-201ENST00000568955 471 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 RN7SL690P-201ENST00000582087 240 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 SNORD11B-201ENST00000607707 90 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 MIR6780A-201ENST00000615089 68 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 AL078604.3-201ENST00000615580 211 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
GPC6Q9Y625 CPHL1P-201ENST00000461341 3407 ntBASIC4.2□□□□□ -1.74
GPC6Q9Y625 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GPC6Q9Y625 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GPC6Q9Y625 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 AC021146.4-201ENST00000309229 279 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 MIR539-201ENST00000365690 78 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 SNORA72.4-201ENST00000384174 132 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 MIR626-201ENST00000385032 94 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 RNA5SP397-201ENST00000391323 118 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 HSPE1P12-201ENST00000412576 301 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 AL162591.2-201ENST00000449634 317 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 AC005921.1-201ENST00000510589 286 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 AC025281.1-201ENST00000567026 265 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 AL391813.1-201ENST00000603098 260 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 MIR6798-201ENST00000612887 67 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 uc_338.32-201ENST00000615087 172 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 AC005562.2-201ENST00000618264 111 ntBASIC4.19□□□□□ -1.74
GPC6Q9Y625 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GPC6Q9Y625 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GPC6Q9Y625 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GPC6Q9Y625 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.19□□□□□ -1.74
GPC6Q9Y625 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms