Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNA5SP447-201ENST00000363749 119 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 Y_RNA.310-201ENST00000365063 113 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 RNU6-748P-201ENST00000384648 107 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 RNU6-768P-201ENST00000384683 107 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 SNORD96B-201ENST00000386148 79 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 MT-TT-201ENST00000387460 66 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 SNORA79-201ENST00000408376 140 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 SNORA11-201ENST00000408789 128 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 HSPE1P21-201ENST00000438283 308 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 RN7SL817P-201ENST00000480777 288 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 FCF1P8-201ENST00000510322 597 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 AC006499.6-201ENST00000511169 607 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 AC090142.3-201ENST00000519012 385 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 AL670379.2-201ENST00000604983 252 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 Y_RNA.43-201ENST00000362670 111 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 SNORD114-19-201ENST00000363072 75 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 SNORA70.2-201ENST00000364506 135 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 SNORA75.5-201ENST00000391291 81 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 RNA5SP397-201ENST00000391323 118 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 RNA5SP201-201ENST00000410316 124 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 RNU2-44P-201ENST00000516795 194 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 SNORD19.2-201ENST00000516978 73 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 CYCSP26-201ENST00000534107 320 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 PARP1P2-201ENST00000556806 195 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 AC015912.2-201ENST00000571053 181 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 Y_RNA.757-201ENST00000578934 114 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 AL356218.2-201ENST00000605264 187 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 U6.115-201ENST00000636045 103 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 MAPK10-263ENST00000641052 4307 ntBASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HRH3Q9Y5N1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AC011266.1-201ENST00000624119 3569 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RNA5SP513-201ENST00000364648 118 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 SNORA18.2-201ENST00000383865 132 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RNY3P5-201ENST00000384127 102 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 MIR3065-201ENST00000390137 79 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RNY4P18-201ENST00000391107 89 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AL592291.1-201ENST00000403830 352 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RNU6-588P-201ENST00000410281 105 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RN7SL132P-201ENST00000478131 296 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AC105137.1-201ENST00000484355 562 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AP001781.1-201ENST00000530977 207 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AP004242.1-201ENST00000533701 349 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 HIGD1AP1-201ENST00000550979 275 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RPS15AP11-201ENST00000594193 385 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AC024220.1-201ENST00000603675 484 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 MIR6830-201ENST00000636015 70 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AC007656.2-201ENST00000624902 4547 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 AC068700.1-201ENST00000565862 3754 ntBASIC4.23□□□□□ -1.73
HRH3Q9Y5N1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HRH3Q9Y5N1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
HRH3Q9Y5N1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HRH3Q9Y5N1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HRH3Q9Y5N1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HRH3Q9Y5N1 AL136164.3-201ENST00000624429 3978 ntBASIC4.22□□□□□ -1.73
HRH3Q9Y5N1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms