Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AL163540.1-201ENST00000485382 386 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.661-201ENST00000516003 99 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC027176.1-201ENST00000560204 514 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC004584.2-201ENST00000570407 410 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 RMST_6.1-201ENST00000611980 203 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR7157-201ENST00000635801 60 ntBASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA9Q9Y5G4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 Z75746.1-201ENST00000440243 2080 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA29-201ENST00000384183 140 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA48.2-201ENST00000390926 124 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 Z98742.2-201ENST00000431564 187 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AC025518.1-201ENST00000479856 347 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 RPL23AP75-201ENST00000491601 451 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA25.10-201ENST00000515926 124 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-579P-201ENST00000516879 102 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AC083806.3-201ENST00000614016 455 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA9Q9Y5G4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-99P-201ENST00000364721 107 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 RNA5SP494-201ENST00000410653 129 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AL590135.1-201ENST00000422215 156 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AC019205.3-201ENST00000424573 156 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AC008267.5-201ENST00000424928 265 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AC016700.2-201ENST00000446011 156 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AC015911.1-201ENST00000495111 156 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 ELOCP31-201ENST00000540463 467 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AC103810.1-201ENST00000579873 453 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA43.4-201ENST00000629559 138 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 AL732372.2-225ENST00000642124 456 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 MFSD8-233ENST00000641482 4860 ntBASIC3.25□□□□□ -1.89
PCDHGA9Q9Y5G4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-137P-201ENST00000363680 108 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR128-1-201ENST00000384921 82 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA12.2-201ENST00000391040 156 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AL358453.1-201ENST00000422522 250 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AC091874.1-201ENST00000511402 339 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA31.6-201ENST00000516241 130 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 RN7SKP295-201ENST00000517264 153 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AP003072.1-201ENST00000531740 145 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 MRPS36P4-201ENST00000534436 298 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 GNAI2P1-201ENST00000541815 315 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AL138963.2-201ENST00000605137 226 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 AC091925.1-201ENST00000623204 462 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms