Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AL356010.1-201ENST00000456364 102 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 HMGN1P7-201ENST00000491722 313 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RPS27P26-201ENST00000494583 239 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC116562.3-201ENST00000506136 177 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNA5SP112-201ENST00000515937 99 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 ACA59.2-201ENST00000517061 156 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC068587.5-201ENST00000528506 175 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC006199.1-201ENST00000548728 219 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AL121992.2-201ENST00000606262 256 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 MIR98-201ENST00000606724 119 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC004492.1-201ENST00000607036 742 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AP001330.5-201ENST00000607176 411 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 Z99129.1-201ENST00000612510 255 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 MIR7515-201ENST00000637837 67 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-60P-201ENST00000364792 103 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNA5SP125-201ENST00000364843 120 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-1215P-201ENST00000384441 102 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-393P-201ENST00000384475 107 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-332P-201ENST00000391193 108 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 CISD1P1-201ENST00000393907 327 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 ARL5AP1-201ENST00000418991 388 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 GTF2IP20-201ENST00000431663 360 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AL596276.1-201ENST00000434465 418 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 DYNLL1P5-201ENST00000467158 270 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC091435.1-201ENST00000505442 584 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU5B-3P-201ENST00000516601 115 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-1069P-201ENST00000516612 133 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-572P-201ENST00000516724 80 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-430P-201ENST00000517078 107 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC105245.1-201ENST00000581934 244 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC008521.1-201ENST00000587471 187 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC121333.1-201ENST00000567488 2709 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-78P-201ENST00000362897 107 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-371P-201ENST00000364283 108 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-434P-201ENST00000384376 107 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-1106P-201ENST00000390845 107 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 FTH1P15-201ENST00000406984 280 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU2-16P-201ENST00000410712 136 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-248P-201ENST00000410720 107 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 NDUFB1P2-201ENST00000449477 176 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-261P-201ENST00000459506 102 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 MTCO3P38-201ENST00000468910 766 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RPL36AP48-201ENST00000485521 314 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC112206.3-201ENST00000514578 389 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 Y_RNA.655-201ENST00000515919 96 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNU6-720P-201ENST00000516363 108 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RNA5SP165-201ENST00000517142 115 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 RN7SKP40-201ENST00000517211 242 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 ANP32BP3-201ENST00000559213 706 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 DPPA3P3-201ENST00000603842 430 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 AC022418.1-201ENST00000624118 445 ntBASIC1.43□□□□□ -2.18
SHANK1Q9Y566 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SHANK1Q9Y566 Y_RNA.318-201ENST00000365131 97 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 Y_RNA.327-201ENST00000365201 102 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 RNU2-49P-201ENST00000410666 184 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 RNU6-373P-201ENST00000411247 98 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 MTATP6P18-201ENST00000417994 673 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 BTF3L4P3-201ENST00000418879 476 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 PTGES3P4-201ENST00000426243 356 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AC004383.1-201ENST00000438135 289 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 RPL7P43-201ENST00000478876 753 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 SMURF2P1-201ENST00000514992 481 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 SNORA25.17-201ENST00000517184 124 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AC069113.1-201ENST00000517763 267 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 MTCO3P23-201ENST00000561363 289 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 DEFB131E-202ENST00000602581 683 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 AL355877.2-201ENST00000603670 358 ntBASIC1.42□□□□□ -2.18
SHANK1Q9Y566 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SHANK1Q9Y566 MTND4P27-201ENST00000450813 1354 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms