Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL359757.2-201ENST00000624309 274 ntBASIC2.55□□□□□ -2
LSM4Q9Y4Z0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.55□□□□□ -2
LSM4Q9Y4Z0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.55□□□□□ -2
LSM4Q9Y4Z0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AL353743.1-202ENST00000431724 1695 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 SNORD50.1-201ENST00000362987 71 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 RNU6-842P-201ENST00000384269 107 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 SNORA26.3-201ENST00000391119 136 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.594-201ENST00000410373 140 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AC110794.1-201ENST00000505816 425 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 RNU6-559P-201ENST00000516151 98 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.670-201ENST00000516255 105 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 RNU6-56P-201ENST00000516986 93 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 MIR4273-201ENST00000582824 84 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 MIR3136-201ENST00000583498 78 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 AP000654.2-201ENST00000605633 586 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 MIR6852-201ENST00000621699 66 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 SNORA43.4-201ENST00000629559 138 ntBASIC2.54□□□□□ -2
LSM4Q9Y4Z0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LSM4Q9Y4Z0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 RNU6-1059P-201ENST00000363752 98 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 U3.13-201ENST00000364804 214 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 RNU6-1297P-201ENST00000384415 104 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 RNU4-47P-201ENST00000410876 114 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AC244505.4-201ENST00000434905 287 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 SSXP5-201ENST00000443473 287 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 HMGB1P35-201ENST00000503360 598 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 APOOP3-201ENST00000536787 586 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 EIF4BP1-201ENST00000554881 351 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 FRG2DP-202ENST00000566967 323 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 MIR5571-201ENST00000577998 113 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AC105245.1-201ENST00000581934 244 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 MIR4276-201ENST00000584832 70 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 RPL30P11-203ENST00000598995 310 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AL356280.1-201ENST00000603614 379 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AL359198.2-201ENST00000611836 194 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 PISRT1.1-201ENST00000616930 107 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AL359697.1-201ENST00000624879 587 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 AL450472.1-202ENST00000637286 180 ntBASIC2.53□□□□□ -2
LSM4Q9Y4Z0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.53□□□□□ -2
LSM4Q9Y4Z0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
LSM4Q9Y4Z0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 RNU1-72P-201ENST00000362976 153 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 SNORA51.4-201ENST00000364993 124 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 RNU6-1286P-201ENST00000383871 107 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 SNORA75.4-201ENST00000391278 119 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 FO393413.1-201ENST00000402892 195 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 RNU6-370P-201ENST00000411008 104 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC104332.2-201ENST00000429959 156 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 GPM6BP3-201ENST00000442797 145 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AL513124.1-201ENST00000450410 614 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC073901.1-201ENST00000462471 408 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 RN7SKP43-201ENST00000516173 320 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC021231.3-201ENST00000558497 370 ntBASIC2.52□□□□□ -2.01
LSM4Q9Y4Z0 AC109446.1-201ENST00000566172 220 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms