Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 RNU6-888P-201ENST00000363010 101 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 RNA5SP428-201ENST00000365129 132 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AC096949.1-201ENST00000412047 152 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 RPL36AP10-201ENST00000421785 322 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 RPL23AP83-201ENST00000434984 473 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AL161651.1-201ENST00000440882 223 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 RNU7-57P-201ENST00000459540 60 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AC109327.1-201ENST00000471666 403 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AC091167.1-201ENST00000492017 396 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 RN7SL244P-201ENST00000493405 297 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AC011944.2-201ENST00000624440 683 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
LHX6Q9UPM6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LHX6Q9UPM6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 ABCC13-202ENST00000463099 3842 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 RNU6-1099P-201ENST00000363533 107 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 SNORD24-201ENST00000383884 75 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 SNORD61-201ENST00000384252 73 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 AC012671.1-201ENST00000451912 203 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 IFNWP4-201ENST00000453148 294 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 MIR3199-2-201ENST00000636243 86 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 FAM35BP-202ENST00000497389 3337 ntBASIC4.86□□□□□ -1.63
LHX6Q9UPM6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX6Q9UPM6 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 AC026241.1-201ENST00000517873 2142 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 AC083899.1-201ENST00000454465 3819 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 RNA5SP191-201ENST00000362585 102 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 Y_RNA.333-201ENST00000365274 102 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 SNORD116-22-201ENST00000384430 92 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 RNU6-816P-201ENST00000390914 107 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 SNORD77.3-201ENST00000391113 65 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 RNU6-1268P-201ENST00000391214 107 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 RNU6-1239P-201ENST00000391310 107 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 RPL23AP52-201ENST00000439311 478 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 AC092754.1-201ENST00000472975 479 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 AC027419.1-201ENST00000522976 328 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 AC122688.1-201ENST00000541494 223 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 MIR3163-201ENST00000581592 73 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 MIR4660-201ENST00000583549 74 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 JPX_2.1-201ENST00000614161 69 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 AC006435.5-201ENST00000624486 112 ntBASIC4.85□□□□□ -1.63
LHX6Q9UPM6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.85□□□□□ -1.63
LHX6Q9UPM6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 RNU1-133P-201ENST00000364867 167 ntBASIC4.84□□□□□ -1.63
LHX6Q9UPM6 Y_RNA.298-201ENST00000364960 107 ntBASIC4.84□□□□□ -1.63
LHX6Q9UPM6 RNU6-690P-201ENST00000365242 106 ntBASIC4.84□□□□□ -1.63
LHX6Q9UPM6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LHX6Q9UPM6 RNU6-644P-201ENST00000391155 98 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms