Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC097372.5-201ENST00000623665 376 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RNU6-1097P-201ENST00000363586 107 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RNU6-105P-201ENST00000363909 104 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 Y_RNA.324-201ENST00000365165 102 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RNU6-108P-201ENST00000365558 107 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AL365203.2-201ENST00000423444 196 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AL445567.1-201ENST00000439121 144 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AL162395.1-201ENST00000457882 422 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RNU7-182P-201ENST00000459009 62 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC093259.1-201ENST00000509755 300 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC009646.1-201ENST00000510455 318 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 SNORD27.1-201ENST00000516319 72 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 RNU6-1178P-201ENST00000516674 107 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC115990.1-201ENST00000526957 301 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC137800.2-201ENST00000574375 120 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 MIR4775-201ENST00000581168 75 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 MIR98-201ENST00000606724 119 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AL022345.1-201ENST00000607292 135 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 U1.36-201ENST00000620684 176 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 MIR1248-201ENST00000629190 106 ntBASIC1.71□□□□□ -2.14
CDH9Q9ULB4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH9Q9ULB4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 RNU6-457P-201ENST00000363999 107 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 RNU6-715P-201ENST00000365204 103 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 VN1R36P-201ENST00000414936 291 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 RPL31P35-201ENST00000431058 377 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AP001893.2-201ENST00000526949 202 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 MIR3915-201ENST00000578518 97 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 CYP2C61P-201ENST00000604072 290 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 AC007494.3-201ENST00000624660 743 ntBASIC1.7□□□□□ -2.14
CDH9Q9ULB4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH9Q9ULB4 RNU6-37P-201ENST00000362692 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU4-21P-201ENST00000362802 126 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-1285P-201ENST00000363480 105 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-11P-201ENST00000364234 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-25P-201ENST00000383873 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-1-201ENST00000383898 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-48P-201ENST00000384161 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-36P-201ENST00000384172 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-4P-201ENST00000384205 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-5P-201ENST00000384238 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-3P-201ENST00000384314 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-16P-201ENST00000384385 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-15P-201ENST00000384534 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-2-201ENST00000384627 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-29P-201ENST00000384637 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-9-201ENST00000384776 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-33P-201ENST00000384793 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNA5SP501-201ENST00000410990 112 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AL669831.1-202ENST00000428504 417 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AL596276.1-201ENST00000434465 418 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 GTF2IP13-201ENST00000438487 386 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AL022238.1-201ENST00000442557 355 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AL133217.1-201ENST00000450980 425 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 ART2BP-201ENST00000453501 499 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNA5SP57-201ENST00000459463 123 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AC018889.1-201ENST00000605372 397 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 RNU6-6P-201ENST00000606623 107 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AC063944.3-201ENST00000609969 533 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH9Q9ULB4 SEPT14P19-203ENST00000633205 211 ntBASIC1.69□□□□□ -2.14
CDH9Q9ULB4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CDH9Q9ULB4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CDH9Q9ULB4 RNU4-42P-201ENST00000364738 142 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms