Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 MIR607-201ENST00000385241 96 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.793-201ENST00000411222 111 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.644-201ENST00000459006 113 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 RN7SKP210-201ENST00000459176 261 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 snoU109.2-201ENST00000459316 135 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 SERF1AP1-201ENST00000514575 187 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.674-201ENST00000516362 113 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 MIR5047-201ENST00000579212 100 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 SNORD84-203ENST00000584275 78 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC005046.1-201ENST00000608515 625 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC240442.1-201ENST00000616055 283 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 AC243829.7-201ENST00000633081 225 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 USP8P1-201ENST00000494673 3183 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AC116096.1-201ENST00000566804 2314 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 SNORD81.1-201ENST00000363064 77 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 SNORD113-8-201ENST00000363497 74 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 RNA5SP72-201ENST00000364442 117 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-662P-201ENST00000384253 104 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 RNY3P4-201ENST00000384428 101 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-125P-201ENST00000384505 107 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.581-201ENST00000391017 97 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 Z85995.1-201ENST00000415547 335 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AL606753.1-201ENST00000427435 87 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 CYCSP4-201ENST00000429682 331 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AC013470.1-201ENST00000453438 462 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 TOMM22P6-201ENST00000465035 409 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AP004242.1-201ENST00000533701 349 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 AC104581.2-201ENST00000572227 430 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 MIR7851-201ENST00000610611 160 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 MFSD8-233ENST00000641482 4860 ntBASIC3.24□□□□□ -1.89
PACSIN3Q9UKS6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 SNORD9-201ENST00000362566 104 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.199-201ENST00000364014 102 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.464-201ENST00000384282 110 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 MTCYBP2-201ENST00000407745 171 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 AC007919.1-201ENST00000429380 217 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 AL627311.1-201ENST00000431514 115 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 RPL23AP62-201ENST00000463396 453 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 RPL21P13-201ENST00000488305 481 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 RPS23P5-201ENST00000495419 428 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 MLLT10P2-201ENST00000506434 249 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 CASP1P1-201ENST00000526345 212 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 AC087441.2-201ENST00000529141 262 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 CBX3P4-201ENST00000538909 354 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 MIR4659A-201ENST00000580269 81 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PACSIN3Q9UKS6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC090740.1-201ENST00000623193 2262 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 MIR208A-201ENST00000362287 71 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-222P-201ENST00000362438 107 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-227P-201ENST00000362865 103 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-1159P-201ENST00000362933 107 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-336P-201ENST00000364891 107 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-166P-201ENST00000384371 107 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.506-201ENST00000384494 102 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 MIR183-201ENST00000384958 110 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 SNORA40C-201ENST00000391285 128 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 SNORA11.1-201ENST00000408133 129 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC007560.1-201ENST00000426912 237 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AL591043.1-201ENST00000432461 424 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 CYCSP35-201ENST00000451978 304 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RN7SL293P-201ENST00000481765 281 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 ANXA2P1-201ENST00000505539 926 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 AC074198.2-201ENST00000508153 258 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU7-175P-201ENST00000515915 61 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-377P-201ENST00000515965 102 ntBASIC3.22□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-496P-201ENST00000516145 99 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms