Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX41Q9UJV9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.47-201ENST00000362697 108 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 RNU6-1159P-201ENST00000362933 107 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 RNA5SP50-201ENST00000363731 107 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 RNA5SP267-201ENST00000364893 126 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 MIR153-2-201ENST00000385225 87 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 MIR767-201ENST00000390228 109 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 RNA5SP354-201ENST00000391247 136 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AC008155.2-201ENST00000464337 397 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 ANXA2P1-201ENST00000505539 926 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AC110794.1-201ENST00000505816 425 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AC093331.1-201ENST00000521474 169 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AC021231.3-201ENST00000558497 370 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AL359198.2-201ENST00000611836 194 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 AP000560.1-201ENST00000624150 1937 ntBASIC4.05□□□□□ -1.76
DDX41Q9UJV9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
DDX41Q9UJV9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MTND5P1-201ENST00000445440 1375 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.574-201ENST00000384766 95 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MIR32-201ENST00000384965 70 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 Z82188.1-201ENST00000436709 154 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 RPS27P29-201ENST00000463110 252 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 TOMM22P6-201ENST00000465035 409 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AC087477.1-201ENST00000465747 340 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MRPS35P2-201ENST00000508242 191 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AC131281.1-201ENST00000522984 164 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 COX6CP5-201ENST00000527162 228 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 KLKP1-201ENST00000595979 403 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AC006557.5-201ENST00000603126 811 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MIR7851-201ENST00000610611 160 ntBASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX41Q9UJV9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
DDX41Q9UJV9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX41Q9UJV9 Z75746.1-201ENST00000440243 2080 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 MIR30E-201ENST00000362104 92 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 RNU6-874P-201ENST00000362390 105 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 Y_RNA.106-201ENST00000363189 100 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 SNORA14A-201ENST00000364773 135 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 RNU6-17P-201ENST00000384245 107 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 RNU6-18P-201ENST00000384527 107 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 RPS4XP2-201ENST00000458402 793 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 SNORD59.2-201ENST00000516873 68 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 RNU6-1198P-201ENST00000516904 67 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX41Q9UJV9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX41Q9UJV9 AC090617.3-201ENST00000573670 475 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 MIR5571-201ENST00000577998 113 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX41Q9UJV9 AL391813.1-201ENST00000603098 260 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 SNORA43.4-201ENST00000629559 138 ntBASIC4.03□□□□□ -1.76
DDX41Q9UJV9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
DDX41Q9UJV9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AL079305.1-201ENST00000623159 3008 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RNU1-33P-201ENST00000364249 162 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RNU4-56P-201ENST00000364700 142 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RNU6-805P-201ENST00000365643 106 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RNU6-541P-201ENST00000384709 110 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AC025518.1-201ENST00000479856 347 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 SCARNA13-201ENST00000516672 275 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RNU6-567P-201ENST00000516746 107 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AC004817.2-201ENST00000561794 651 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AC010928.2-201ENST00000588017 287 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RPS15AP11-201ENST00000594193 385 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 AL138963.2-201ENST00000605137 226 ntBASIC4.02□□□□□ -1.77
DDX41Q9UJV9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DDX41Q9UJV9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms