Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
COL20A1Q9P218 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL20A1Q9P218 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
COL20A1Q9P218 AC006026.1-201ENST00000444025 1803 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL20A1Q9P218 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 AL356057.3-201ENST00000402607 340 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC063976.3-201ENST00000426849 329 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 MTND3P9-201ENST00000429526 346 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC009969.1-201ENST00000438726 172 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 FTH1P25-201ENST00000447665 469 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AP001025.1-201ENST00000486139 332 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 Y_RNA.670-201ENST00000516255 105 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 HPRT1P3-201ENST00000539521 576 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC109446.1-201ENST00000566172 220 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 MIR4273-201ENST00000582824 84 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AL133255.1-201ENST00000606374 441 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC009229.3-201ENST00000608056 282 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC084781.2-201ENST00000615568 161 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC007792.1-201ENST00000623023 402 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 AL669831.3-213ENST00000636676 183 ntBASIC3.15□□□□□ -1.91
COL20A1Q9P218 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL20A1Q9P218 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
COL20A1Q9P218 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 Y_RNA.2-201ENST00000362330 96 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 RNU6-622P-201ENST00000384272 103 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 RNU6-1222P-201ENST00000384615 107 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 MIR544A-201ENST00000384855 91 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 MIR181A2-201ENST00000384863 110 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 AL591034.2-201ENST00000402839 359 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 RNA5SP21-201ENST00000410917 96 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 USMG5P1-201ENST00000425964 177 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 Z82205.1-201ENST00000428456 297 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AC090525.1-201ENST00000479116 478 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 MIR4513-201ENST00000581077 86 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 AC090897.2-201ENST00000581715 130 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AC011494.1-201ENST00000596454 237 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 AL160413.1-201ENST00000622780 310 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
COL20A1Q9P218 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.14□□□□□ -1.91
COL20A1Q9P218 AL136360.1-201ENST00000503377 1900 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.13□□□□□ -1.91
COL20A1Q9P218 RNU6-1083P-201ENST00000384022 107 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 SNORD116-29-201ENST00000384516 83 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 RNU6-174P-201ENST00000410406 106 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC138623.1-201ENST00000418060 216 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 EIF4EP2-201ENST00000422816 654 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC112220.1-201ENST00000434628 355 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC004383.1-201ENST00000438135 289 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 RPL30P15-201ENST00000457129 321 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 RPS29P27-201ENST00000463711 170 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC097473.1-201ENST00000508142 408 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 MTND4LP22-201ENST00000508209 276 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 RNU6-1170P-201ENST00000515974 106 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.13□□□□□ -1.91
COL20A1Q9P218 RPS15AP11-201ENST00000594193 385 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 RPL23AP78-201ENST00000599928 470 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AL133393.1-201ENST00000603277 287 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 CYP2C61P-201ENST00000604072 290 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 AC090115.4-201ENST00000609970 188 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL20A1Q9P218 MTND5P30-201ENST00000452896 1731 ntBASIC3.13□□□□□ -1.91
COL20A1Q9P218 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL20A1Q9P218 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 SNORD114-19-201ENST00000363072 75 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 Y_RNA.146-201ENST00000363549 102 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 Y_RNA.187-201ENST00000363918 113 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 RNU6-692P-201ENST00000384496 107 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 MIR9-1-201ENST00000385198 89 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 EIF1AXP1-201ENST00000419267 435 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 MTND1P14-201ENST00000427400 950 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
COL20A1Q9P218 ELOCP24-201ENST00000456370 334 ntBASIC3.12□□□□□ -1.91
COL20A1Q9P218 RNU7-152P-201ENST00000458982 64 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms