Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC008737.2-201ENST00000599446 118 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 AC136443.5-201ENST00000603741 370 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 AC009229.3-201ENST00000608056 282 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 AC019193.3-201ENST00000609144 554 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 uc_338.22-201ENST00000622722 187 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 AC002064.3-201ENST00000623448 346 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 Z69720.2-201ENST00000624755 279 ntBASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.94□□□□□ -1.94
NCKIPSDQ9NZQ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC004944.1-201ENST00000517807 3059 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC010889.1-201ENST00000566193 2666 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-37P-201ENST00000362692 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 Y_RNA.112-201ENST00000363250 102 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-11P-201ENST00000364234 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-25P-201ENST00000383873 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-1-201ENST00000383898 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-48P-201ENST00000384161 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-36P-201ENST00000384172 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-4P-201ENST00000384205 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-5P-201ENST00000384238 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-3P-201ENST00000384314 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-16P-201ENST00000384385 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-15P-201ENST00000384534 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-2-201ENST00000384627 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-29P-201ENST00000384637 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-9-201ENST00000384776 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-33P-201ENST00000384793 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-750P-201ENST00000390946 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AL445529.1-201ENST00000398713 389 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC096649.2-201ENST00000416186 393 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 USP9YP30-201ENST00000430729 455 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AL139132.1-201ENST00000431587 344 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 MTND3P2-201ENST00000438452 342 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 SNORD5.1-201ENST00000458800 75 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 SMURF2P1-201ENST00000514992 481 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-988P-201ENST00000519081 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 GTF3AP2-201ENST00000557014 266 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 MIR3162-201ENST00000581818 82 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AL121917.1-203ENST00000605534 577 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-6P-201ENST00000606623 107 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AC107871.2-201ENST00000612894 502 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AL078596.1-201ENST00000624856 447 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 AL355596.1-201ENST00000565399 3996 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 MTND5P16-201ENST00000460269 1703 ntBASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NCKIPSDQ9NZQ3 CDC27P3-201ENST00000635418 1910 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 SNORA9.2-201ENST00000365361 133 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 SNORA22B-201ENST00000383876 138 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-890P-201ENST00000384121 107 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-842P-201ENST00000384269 107 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-308P-201ENST00000390957 107 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 U3.37-201ENST00000408528 213 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 SNORD56-201ENST00000413522 71 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AL645568.3-201ENST00000433683 316 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AL137792.2-201ENST00000443484 235 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 MIR2053-201ENST00000459295 91 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC117440.1-201ENST00000474107 571 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 RNA5SP356-201ENST00000515972 94 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-976P-201ENST00000516086 111 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 TRAV32-201ENST00000553993 340 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC020895.1-201ENST00000595362 272 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC011494.1-201ENST00000596454 237 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC008739.2-201ENST00000597006 317 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AL033523.1-201ENST00000605153 153 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC011890.2-201ENST00000613393 294 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 AC099654.7-201ENST00000635788 2127 ntBASIC2.92□□□□□ -1.94
NCKIPSDQ9NZQ3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-1115P-201ENST00000362490 106 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 Y_RNA.144-201ENST00000363521 113 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 Y_RNA.459-201ENST00000384251 102 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 RNU6-72P-201ENST00000384285 79 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 MIR517A-201ENST00000385001 87 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 MIR518D-201ENST00000385014 87 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 SNORD88.1-201ENST00000408684 91 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 AL030996.1-201ENST00000411430 235 ntBASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.91□□□□□ -1.94
NCKIPSDQ9NZQ3 AL096701.2-201ENST00000416920 238 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms