Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU6-293P-201ENST00000411259 106 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 ISCA1P6-201ENST00000427740 390 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC243964.1-201ENST00000441814 261 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 MTND2P4-201ENST00000445034 1004 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 MTCYBP1-201ENST00000454315 1119 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AL162395.1-201ENST00000457882 422 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 UBL5P3-201ENST00000475112 231 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC106038.2-201ENST00000520706 568 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 COPS8P3-201ENST00000526024 482 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC009094.1-201ENST00000564443 426 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 MIR3136-201ENST00000583498 78 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AL590229.1-201ENST00000603497 542 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC024933.1-201ENST00000608472 348 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 MIR8081-201ENST00000611533 95 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.37□□□□□ -2.19
CLN6Q9NWW5 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.37□□□□□ -2.19
CLN6Q9NWW5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 RNU6-661P-201ENST00000362409 107 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 RNU6-1303P-201ENST00000364841 107 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 RNU6-195P-201ENST00000411352 109 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 VN1R108P-201ENST00000431580 830 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 HMGN2P18-201ENST00000450680 270 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 RNU7-125P-201ENST00000458760 62 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AC005741.1-201ENST00000511094 432 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AC109479.2-201ENST00000517842 174 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AK6P1-201ENST00000540219 478 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AC005786.1-201ENST00000588553 154 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 AC110760.3-201ENST00000598794 467 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 LINC02555-201ENST00000563933 1951 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
CLN6Q9NWW5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 SNORD114-6-201ENST00000364393 72 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 RNU4-56P-201ENST00000364700 142 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 RNU6-26P-201ENST00000383985 107 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 RNU6-439P-201ENST00000384188 106 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 MIR454-201ENST00000390180 115 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AL627390.1-201ENST00000396055 340 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC013410.2-201ENST00000422627 201 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 FTH1P25-201ENST00000447665 469 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AMD1P1-201ENST00000457220 922 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC130509.1-201ENST00000464158 433 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 RNA5SP503-201ENST00000517047 117 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 RNU6-232P-201ENST00000517144 64 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC023050.3-201ENST00000541142 333 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC008752.3-201ENST00000588113 712 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AF131215.7-201ENST00000602443 707 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC107304.1-201ENST00000604229 296 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC123912.5-201ENST00000605470 343 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 Z99289.3-201ENST00000605586 594 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 MIR6845-201ENST00000613182 61 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AF246928.1-201ENST00000623768 87 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AC120349.3-201ENST00000624377 529 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 SEPT14P19-203ENST00000633205 211 ntBASIC1.35□□□□□ -2.19
CLN6Q9NWW5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLN6Q9NWW5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU6-1141P-201ENST00000364520 107 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU6-336P-201ENST00000364891 107 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 Y_RNA.332-201ENST00000365271 113 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU6-142P-201ENST00000384019 107 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 SNORA70B-201ENST00000384210 135 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU6-43P-201ENST00000384302 107 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU6-692P-201ENST00000384496 107 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms