Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 MAPK10-266ENST00000641066 6555 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 Y_RNA.11-201ENST00000362375 109 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 RNU4-35P-201ENST00000362588 141 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 RNA5SP197-201ENST00000363357 119 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 Y_RNA.187-201ENST00000363918 113 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 MIR23B-201ENST00000384832 97 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 MIR670-201ENST00000390142 98 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 SNORA11-201ENST00000408789 128 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 MTND4P28-201ENST00000426217 387 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 RN7SL293P-201ENST00000481765 281 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AF186996.7-201ENST00000492781 209 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC016256.1-201ENST00000547971 354 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 MIR3922-201ENST00000585192 84 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 Z98751.3-201ENST00000604447 521 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 AC080078.3-201ENST00000605407 463 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 FAM35CP-201ENST00000554755 2470 ntBASIC2.73□□□□□ -1.97
LIN7CQ9NUP9 MTND5P10-201ENST00000603719 1809 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNU5B-2P-201ENST00000363036 113 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 Y_RNA.146-201ENST00000363549 102 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNU6-595P-201ENST00000363944 107 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNU4-56P-201ENST00000364700 142 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 SNORA41-201ENST00000384675 132 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 SNORD17-201ENST00000390930 237 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNA5SP494-201ENST00000410653 129 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RPS20P15-201ENST00000412792 311 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AL358453.1-201ENST00000422522 250 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 Z82188.1-201ENST00000436709 154 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC011816.1-201ENST00000441346 546 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 snoU13.6-201ENST00000458785 104 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 snoU13.22-201ENST00000459428 104 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC080013.2-201ENST00000460866 323 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC025518.1-201ENST00000479856 347 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC022493.2-201ENST00000506122 481 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNU1-143P-201ENST00000516296 146 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 SCARNA20.6-201ENST00000517251 106 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AL356280.1-201ENST00000603614 379 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AL670379.2-201ENST00000604983 252 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 U1.23-201ENST00000610293 146 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 uc_338.1-201ENST00000612113 180 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 RNU1-68P-201ENST00000615382 146 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC084757.4-201ENST00000616350 526 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 U1.39-201ENST00000621562 146 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AL160413.1-201ENST00000622780 310 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 AC090517.3-201ENST00000625170 141 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 MTCO1P12-201ENST00000414273 1543 ntBASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.72□□□□□ -1.97
LIN7CQ9NUP9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 RNY1P16-201ENST00000363063 111 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.315-201ENST00000365117 102 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 RNU6-1032P-201ENST00000384100 107 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC012306.1-201ENST00000423267 114 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AL445687.1-201ENST00000439946 251 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 UBE2V1P7-201ENST00000446395 340 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 MIR2053-201ENST00000459295 91 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC087477.1-201ENST00000465747 340 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC027575.1-201ENST00000481064 460 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC068781.1-201ENST00000488231 618 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 RNU6-470P-201ENST00000515954 104 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 RNA5SP380-201ENST00000517190 98 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AL590705.4-201ENST00000532209 134 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC010928.2-201ENST00000588017 287 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AL713866.2-201ENST00000603579 219 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 RPL23AP88-201ENST00000605759 454 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 MIR92B-201ENST00000607575 96 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC022140.2-201ENST00000623500 188 ntBASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms