Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SNORD115-32-201ENST00000364079 82 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 RNU4-42P-201ENST00000364738 142 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 RNU6-738P-201ENST00000384531 106 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 SNORA48.2-201ENST00000390926 124 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 SNORA12.2-201ENST00000391040 156 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 SNORA26.3-201ENST00000391119 136 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AC126124.2-201ENST00000413542 321 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 MTCO3P29-201ENST00000432119 779 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 MTND4LP22-201ENST00000508209 276 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 RN7SKP57-201ENST00000517248 293 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 RNU1-30P-201ENST00000606575 163 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AC099778.2-201ENST00000610904 211 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AC137590.2-201ENST00000619709 240 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AL606534.2-204ENST00000635008 178 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 AC005592.1-201ENST00000566527 1640 ntBASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCM2LQ9NUG4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AL109809.4-201ENST00000603520 2185 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 MTND4P1-201ENST00000457501 1466 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 SNORA29-201ENST00000384183 140 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 snoU13.30-201ENST00000458951 104 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 RPL23AP75-201ENST00000491601 451 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 RPL22P13-201ENST00000493291 347 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 RNU6-567P-201ENST00000516746 107 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC091144.1-201ENST00000519573 138 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 MIR3136-201ENST00000583498 78 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC073410.2-201ENST00000603240 332 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AL159153.1-201ENST00000619688 317 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC099654.7-201ENST00000635788 2127 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
CCM2LQ9NUG4 AL359854.1-201ENST00000614203 1594 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 Y_RNA.145-201ENST00000363527 102 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 SNORA63C-201ENST00000364578 129 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 RNU4-56P-201ENST00000364700 142 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 U3.13-201ENST00000364804 214 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 RNA5SP267-201ENST00000364893 126 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 U3.26-201ENST00000391236 204 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 SAR1AP2-201ENST00000392696 594 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AL160004.2-201ENST00000432935 350 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AC009296.1-201ENST00000443146 155 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 snoU13.14-201ENST00000459372 104 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AC087477.1-201ENST00000465747 340 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 RPL30P1-201ENST00000488676 339 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AF186996.7-201ENST00000492781 209 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AC015911.1-201ENST00000495111 156 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AC021146.2-201ENST00000504736 556 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 MRPS36P2-201ENST00000512569 299 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 RNU4-77P-201ENST00000516692 156 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AL137843.1-201ENST00000605078 385 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 RMST_6.1-201ENST00000611980 203 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 MIR4272-201ENST00000635924 64 ntBASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CCM2LQ9NUG4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 MFSD8-233ENST00000641482 4860 ntBASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
CCM2LQ9NUG4 MIR628-201ENST00000385229 95 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms