Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC091144.1-201ENST00000519573 138 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.43□□□□□ -1.7
ATG3Q9NT62 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.43□□□□□ -1.7
ATG3Q9NT62 AL162424.1-201ENST00000602325 221 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 AC116096.1-201ENST00000566804 2314 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATG3Q9NT62 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 AC058791.1-201ENST00000608412 3198 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATG3Q9NT62 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATG3Q9NT62 RNU1-18P-201ENST00000363062 164 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 Y_RNA.504-201ENST00000384481 104 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 RNU6-959P-201ENST00000384671 107 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 AL592148.1-201ENST00000413568 445 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 HMGB1P27-201ENST00000431429 603 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 AL591043.1-201ENST00000432461 424 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 RNU7-170P-201ENST00000459303 61 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 FCF1P8-201ENST00000510322 597 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 RPL23AP94-201ENST00000512518 302 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 APOOP4-201ENST00000513530 597 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 RNY3P16-201ENST00000516338 101 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 AC104581.2-201ENST00000572227 430 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.42□□□□□ -1.7
ATG3Q9NT62 AC097372.5-201ENST00000623665 376 ntBASIC4.42□□□□□ -1.7
ATG3Q9NT62 RNU4-90P-201ENST00000362773 141 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 MIR1289-1-201ENST00000408836 144 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 RPL19P1-201ENST00000411635 428 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 AL117339.3-201ENST00000418733 162 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 U8.21-201ENST00000459536 136 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 RPS29P27-201ENST00000463711 170 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 RNU6-1219P-201ENST00000516143 112 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 RNU6-479P-201ENST00000516348 105 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 CASP1P1-201ENST00000526345 212 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 MIR4282-201ENST00000583613 67 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 AC004852.3-201ENST00000614131 326 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 AC048347.1-201ENST00000624621 427 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATG3Q9NT62 NCAPGP1-201ENST00000505112 1814 ntBASIC4.41□□□□□ -1.7
ATG3Q9NT62 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.41□□□□□ -1.7
ATG3Q9NT62 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ATG3Q9NT62 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.4□□□□□ -1.7
ATG3Q9NT62 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.4□□□□□ -1.7
ATG3Q9NT62 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
ATG3Q9NT62 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ATG3Q9NT62 UBE2L2-201ENST00000254302 429 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 RNU6-923P-201ENST00000364753 107 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 SNORD63-201ENST00000384262 68 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 Y_RNA.510-201ENST00000384511 114 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 RNU6-1154P-201ENST00000391001 104 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 SNORA53-201ENST00000391141 249 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 U3.26-201ENST00000391236 204 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AL033519.2-201ENST00000403958 392 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 BMS1P22-201ENST00000414726 313 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AL358453.1-201ENST00000422522 250 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC006989.1-201ENST00000427212 131 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 RPL23AP45-201ENST00000476406 468 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 ANXA2P1-201ENST00000505539 926 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 RN7SKP83-201ENST00000516512 178 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 RNU6-612P-201ENST00000516909 102 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 RNU6-840P-201ENST00000517275 65 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 MIR1273C-201ENST00000578669 77 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG3Q9NT62 AC090617.7-201ENST00000623952 126 ntBASIC4.4□□□□□ -1.71
ATG3Q9NT62 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATG3Q9NT62 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG3Q9NT62 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG3Q9NT62 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG3Q9NT62 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG3Q9NT62 RNU6-1301P-201ENST00000362724 104 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 RNA5SP197-201ENST00000363357 119 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 RNU6-512P-201ENST00000364438 103 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 RNU6-326P-201ENST00000365480 107 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 AC006028.1-201ENST00000438379 402 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 ANP32BP2-201ENST00000454525 545 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG3Q9NT62 RPS15AP34-201ENST00000487776 387 ntBASIC4.39□□□□□ -1.71
ATG3Q9NT62 RNU6-1315P-201ENST00000517187 99 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms