Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 Y_RNA.689-201ENST00000516589 107 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 SNORD60.2-201ENST00000516883 86 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC019176.1-201ENST00000518519 225 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.84□□□□□ -2.27
CISHQ9NSE2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.84□□□□□ -2.27
CISHQ9NSE2 MIR5094-201ENST00000578766 85 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 MIR3937-201ENST00000580135 106 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 FAM106DP-201ENST00000586416 501 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AL606834.3-201ENST00000602615 496 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC004492.1-201ENST00000607036 742 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AL359547.2-201ENST00000615810 418 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.84□□□□□ -2.27
CISHQ9NSE2 SNORD32B-201ENST00000364460 84 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 MIR520A-201ENST00000384862 85 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 RN7SKP61-201ENST00000410642 295 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.83□□□□□ -2.28
CISHQ9NSE2 RPL21P111-201ENST00000418453 477 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 RPL23AP30-201ENST00000432419 501 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.83□□□□□ -2.28
CISHQ9NSE2 RPS27AP8-201ENST00000452665 445 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
CISHQ9NSE2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CISHQ9NSE2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.83□□□□□ -2.28
CISHQ9NSE2 AC023050.2-201ENST00000544968 387 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 CYP3A52P-201ENST00000563326 91 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 AC109446.2-201ENST00000567872 497 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 MIR548AC-201ENST00000585049 88 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 NIFKP6-201ENST00000598115 845 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CISHQ9NSE2 AC018630.2-201ENST00000534866 2403 ntBASIC0.83□□□□□ -2.28
CISHQ9NSE2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CISHQ9NSE2 SNORD56.1-201ENST00000362913 68 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 RNU1-124P-201ENST00000363861 145 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 RNU6-1065P-201ENST00000384513 106 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AL136310.1-201ENST00000404926 654 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 RAP1BP3-201ENST00000407180 549 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC123900.1-201ENST00000420390 96 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 HSPE1P9-201ENST00000440046 311 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 KATNBL1P3-201ENST00000443475 909 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC097473.1-201ENST00000508142 408 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC115990.1-201ENST00000526957 301 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC011979.2-201ENST00000527568 352 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC013828.2-201ENST00000532487 235 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 BNIP3P6-201ENST00000549284 499 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC015688.6-201ENST00000577737 104 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 BNIP3P31-201ENST00000604515 566 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC018889.1-201ENST00000605372 397 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC083806.3-201ENST00000614016 455 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.82□□□□□ -2.28
CISHQ9NSE2 AL359740.1-201ENST00000624340 592 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC120349.3-201ENST00000624377 529 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 AC100821.1-201ENST00000523153 2479 ntBASIC0.82□□□□□ -2.28
CISHQ9NSE2 SNORA4.1-201ENST00000364263 144 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 SNORA29-201ENST00000384183 140 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 RPS3AP36-201ENST00000398190 775 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 MRPL35P1-201ENST00000404272 572 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 MTATP6P20-201ENST00000414147 562 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AL161935.2-201ENST00000414627 60 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.81□□□□□ -2.28
CISHQ9NSE2 AL358794.1-201ENST00000445689 381 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.81□□□□□ -2.28
CISHQ9NSE2 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 RNA5SP481-201ENST00000516814 122 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 SUMO2P18-201ENST00000518873 252 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.81□□□□□ -2.28
CISHQ9NSE2 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AL592221.1-201ENST00000605266 382 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 AL356596.1-201ENST00000624230 379 ntBASIC0.81□□□□□ -2.28
CISHQ9NSE2 Y_RNA.46-201ENST00000362695 102 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 RNU6-1222P-201ENST00000384615 107 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC069282.1-201ENST00000411911 526 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.8□□□□□ -2.28
CISHQ9NSE2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.8□□□□□ -2.28
CISHQ9NSE2 MTND1P30-201ENST00000441241 901 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC007969.2-201ENST00000441891 191 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC114982.1-201ENST00000469402 321 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC134050.1-201ENST00000495088 933 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC016550.1-201ENST00000505348 785 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.8□□□□□ -2.28
CISHQ9NSE2 AP003168.1-201ENST00000530091 307 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC092451.2-201ENST00000538746 658 ntBASIC0.8□□□□□ -2.28
CISHQ9NSE2 AC011604.1-201ENST00000545978 196 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms