Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC010149.2-201ENST00000637608 315 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC006927.4-201ENST00000639187 543 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 AC092881.1-201ENST00000638218 2733 ntBASIC0.47□□□□□ -2.33
CDC42SE1Q9NRR8 RNU4-92P-201ENST00000363783 136 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-61P-201ENST00000365528 109 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 SNORD115.1-201ENST00000391109 76 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA40.6-201ENST00000391153 128 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 HIGD1AP15-201ENST00000416198 280 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC010975.2-201ENST00000427781 588 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC244670.1-201ENST00000436879 112 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC107083.1-201ENST00000439643 279 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC069257.2-201ENST00000441819 155 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1041P-201ENST00000516254 102 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-197P-201ENST00000516680 100 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-685P-201ENST00000517088 95 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC105185.1-201ENST00000518705 535 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC136628.3-201ENST00000521868 290 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC021231.3-201ENST00000558497 370 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 MTCO2P2-201ENST00000591258 225 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC106800.4-201ENST00000614905 153 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AP000484.1-201ENST00000620067 1252 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 MIR8057-201ENST00000620957 69 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 MIR6719-201ENST00000622428 87 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AC243829.7-201ENST00000633081 225 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 AL450472.1-202ENST00000637286 180 ntBASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.46□□□□□ -2.34
CDC42SE1Q9NRR8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1123P-201ENST00000362347 106 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 Y_RNA.22-201ENST00000362492 102 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-931P-201ENST00000363850 107 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA70.2-201ENST00000364506 135 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1242P-201ENST00000391052 103 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 MTCYBP36-201ENST00000404146 440 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AL590135.1-201ENST00000422215 156 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC019205.3-201ENST00000424573 156 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RAB28P5-201ENST00000427490 651 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC016700.2-201ENST00000446011 156 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AL353705.4-201ENST00000449661 238 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC013470.1-201ENST00000453438 462 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNU7-14P-201ENST00000459331 62 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 SNORD124-201ENST00000459577 104 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RPL39P38-201ENST00000467018 153 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC004223.1-201ENST00000479840 271 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC015911.1-201ENST00000495111 156 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-322P-201ENST00000516010 103 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 RNA5SP384-201ENST00000516615 116 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AL512310.1-201ENST00000548639 172 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC004817.2-201ENST00000561794 651 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 MIR5692A1-201ENST00000580523 69 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 HMGN1P30-201ENST00000589286 268 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 BNIP3P16-201ENST00000589779 534 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 BNIP3P40-201ENST00000596017 556 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC092140.2-201ENST00000618027 521 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AC009509.4-201ENST00000619202 509 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 AL359740.1-201ENST00000624340 592 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 MIR338-201ENST00000636369 67 ntBASIC0.45□□□□□ -2.34
CDC42SE1Q9NRR8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 U3.4-201ENST00000363352 213 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA33-201ENST00000363664 130 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 U3.9-201ENST00000363823 204 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 Y_RNA.302-201ENST00000364997 102 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-378P-201ENST00000384324 107 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR7-3-201ENST00000384898 110 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR558-201ENST00000384920 94 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR449B-201ENST00000384995 97 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1000P-201ENST00000391066 106 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA40.18-201ENST00000391200 128 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 RPL23AP95-201ENST00000426806 265 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC078809.1-201ENST00000427601 140 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC004975.1-201ENST00000428733 208 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MTND5P15-201ENST00000434246 349 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 GTF2IP13-201ENST00000438487 386 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MTCO2P29-201ENST00000465212 189 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC068587.2-201ENST00000478386 781 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC004924.1-201ENST00000480160 781 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms