Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 Z69720.2-201ENST00000624755 279 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 OR5AK4P-201ENST00000635912 903 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 ZNF72P-201ENST00000425869 1908 ntBASIC2.14□□□□□ -2.07
HPS4Q9NQG7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.14□□□□□ -2.07
HPS4Q9NQG7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RNU6-1303P-201ENST00000364841 107 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RNU5E-7P-201ENST00000365290 117 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RNU6-1103P-201ENST00000384150 107 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RNU6-393P-201ENST00000384475 107 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RNU4-55P-201ENST00000410731 137 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AL356010.1-201ENST00000456364 102 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 GMFBP1-201ENST00000467831 427 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC079382.1-201ENST00000493346 557 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 MRPS17P9-201ENST00000511924 393 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC010493.1-201ENST00000513479 292 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC105417.1-201ENST00000514691 285 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RN7SKP219-201ENST00000516825 296 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AP005435.4-201ENST00000529514 284 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC007684.1-201ENST00000609671 477 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 AC131280.1-202ENST00000624067 4211 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
HPS4Q9NQG7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.13□□□□□ -2.07
HPS4Q9NQG7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.1-201ENST00000352915 104 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.3-201ENST00000362331 103 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.409-201ENST00000383990 98 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 SNORD70.1-201ENST00000391007 85 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 RNU2-29P-201ENST00000410423 189 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 RNU2-23P-201ENST00000410545 195 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 HMGB3P2-201ENST00000411913 584 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 CYCSP49-201ENST00000420810 319 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 SRIP2-201ENST00000428470 166 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC002486.1-201ENST00000435098 391 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC007677.1-201ENST00000445757 515 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 SCARNA18-201ENST00000459004 134 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 HMGB1P29-201ENST00000505659 499 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC093249.1-201ENST00000567049 203 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC008752.3-201ENST00000588113 712 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC008749.1-201ENST00000597650 306 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 MIR6845-201ENST00000613182 61 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AC008121.3-201ENST00000618726 433 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AL158209.2-201ENST00000619266 216 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
HPS4Q9NQG7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HPS4Q9NQG7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 RNU6-434P-201ENST00000384376 107 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 RNU6-1127P-201ENST00000384580 107 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 RNU6-780P-201ENST00000391030 104 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 C8orf59P1-201ENST00000429930 303 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 PRPS1P1-201ENST00000445305 876 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC082651.2-201ENST00000496833 166 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC107401.1-201ENST00000503426 685 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 RNU2-69P-201ENST00000516061 100 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 RNU6-720P-201ENST00000516363 108 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 SNORA48.11-201ENST00000517015 89 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 MTATP6P3-201ENST00000581686 676 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC005034.5-201ENST00000604219 466 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 APOOP1-201ENST00000604695 592 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC068792.1-201ENST00000621354 417 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 YWHAEP7-203ENST00000622054 312 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 AC022418.1-201ENST00000624118 445 ntBASIC2.11□□□□□ -2.07
HPS4Q9NQG7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms