Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RPL23AP32-201ENST00000395315 459 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 MRPL42P2-201ENST00000403169 426 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 MTND5P25-201ENST00000430499 799 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 MTATP6P16-201ENST00000434543 526 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 RPL9P9-202ENST00000466501 579 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 SNORA31.16-201ENST00000516773 139 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 SUMO2P18-201ENST00000518873 252 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 HMGN1P30-201ENST00000589286 268 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 AC012507.3-201ENST00000603556 477 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 MIR6798-201ENST00000612887 67 ntBASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.13□□□□□ -2.23
VCX3AQ9NNX9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RNU6-501P-201ENST00000364072 100 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RNU6-43P-201ENST00000384302 107 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RNU6-692P-201ENST00000384496 107 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 Y_RNA.576-201ENST00000384781 102 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 MIR520A-201ENST00000384862 85 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 SNORA3.2-201ENST00000408221 125 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RNU6-293P-201ENST00000411259 106 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AL365184.2-201ENST00000431139 435 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AL606662.1-201ENST00000445763 553 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RNU1-123P-201ENST00000458950 160 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 snoU13.30-201ENST00000458951 104 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RPL36AP21-201ENST00000490372 323 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AL133373.1-201ENST00000497098 94 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 MTCYBP18-201ENST00000501056 747 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC022616.3-201ENST00000523940 148 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AP001893.2-201ENST00000526949 202 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC109446.1-201ENST00000566172 220 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AP003465.2-201ENST00000602571 373 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 AC064859.1-201ENST00000624741 174 ntBASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VCX3AQ9NNX9 RNA5SP327-201ENST00000362494 101 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-37P-201ENST00000362692 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-179P-201ENST00000363350 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-11P-201ENST00000364234 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-25P-201ENST00000383873 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-1-201ENST00000383898 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-48P-201ENST00000384161 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-36P-201ENST00000384172 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-4P-201ENST00000384205 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-5P-201ENST00000384238 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-3P-201ENST00000384314 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-16P-201ENST00000384385 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-15P-201ENST00000384534 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-2-201ENST00000384627 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-29P-201ENST00000384637 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-9-201ENST00000384776 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-33P-201ENST00000384793 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 MIR620-201ENST00000385232 95 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 MRPL35P1-201ENST00000404272 572 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-1245P-201ENST00000411130 106 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AL161935.2-201ENST00000414627 60 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AL590135.1-201ENST00000422215 156 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC019205.3-201ENST00000424573 156 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC010975.2-201ENST00000427781 588 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC016700.2-201ENST00000446011 156 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC079448.1-201ENST00000449377 373 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 HMGN2P9-201ENST00000476875 229 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC015911.1-201ENST00000495111 156 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC090115.3-201ENST00000553218 849 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 PCMTD1P2-201ENST00000565017 355 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 SNORA59B-202ENST00000578183 701 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 MIR3136-201ENST00000583498 78 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 RNU6-6P-201ENST00000606623 107 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC138749.5-201ENST00000611461 208 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 AC116165.2-201ENST00000616705 206 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 IGHVIII-44-202ENST00000636235 289 ntBASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VCX3AQ9NNX9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VCX3AQ9NNX9 RNU6-862P-201ENST00000362804 105 ntBASIC1.1□□□□□ -2.23
VCX3AQ9NNX9 RNU6-438P-201ENST00000365561 103 ntBASIC1.1□□□□□ -2.23
VCX3AQ9NNX9 RNU6-116P-201ENST00000384042 109 ntBASIC1.1□□□□□ -2.23
VCX3AQ9NNX9 SNORA32.2-201ENST00000384049 122 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms