Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 U2.12-201ENST00000613778 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.20-201ENST00000613956 192 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.9-201ENST00000615427 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.11-201ENST00000616345 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.2-201ENST00000616535 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 AL590240.4-201ENST00000616908 390 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.3-201ENST00000617785 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.19-201ENST00000618602 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 RNU2-1-201ENST00000618664 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.6-201ENST00000619225 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.5-201ENST00000619465 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 U2.10-201ENST00000620268 191 ntBASIC1.18□□□□□ -2.22
SND1-IT1Q9HBX3 LINC02555-201ENST00000563933 1951 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RNU4-42P-201ENST00000364738 142 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 SNORD48-201ENST00000364953 64 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RNU6-393P-201ENST00000384475 107 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RNU6-606P-201ENST00000384721 111 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC123900.1-201ENST00000420390 96 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RPL23AP95-201ENST00000426806 265 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC133104.1-201ENST00000429100 218 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AL022238.1-201ENST00000442557 355 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 PRPS1P1-201ENST00000445305 876 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RPS29P15-201ENST00000458329 171 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 RNA5SP269-201ENST00000459032 137 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AP001486.1-201ENST00000463339 476 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 YWHAEP4-201ENST00000505390 198 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 MTCO3P7-201ENST00000510008 774 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC010486.1-201ENST00000511793 424 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 SNORA18.6-201ENST00000516792 115 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 SUB1P4-201ENST00000566062 339 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 AC241585.2-209ENST00000638217 143 ntBASIC1.17□□□□□ -2.22
SND1-IT1Q9HBX3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 MIR424-201ENST00000362227 98 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 SNORD32A-201ENST00000364805 84 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 RNU6-692P-201ENST00000384496 107 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 MIR1-2-201ENST00000384961 85 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 SNORA11.1-201ENST00000408133 129 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 RNA5SP201-201ENST00000410316 124 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 RNU6-248P-201ENST00000410720 107 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AL590135.1-201ENST00000422215 156 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC019205.3-201ENST00000424573 156 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC010975.2-201ENST00000427781 588 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 SNAP23P1-201ENST00000433229 246 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC016700.2-201ENST00000446011 156 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 MTND1P18-201ENST00000448191 573 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AL353705.4-201ENST00000449661 238 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 HMGN2P18-201ENST00000450680 270 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC015911.1-201ENST00000495111 156 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 RPL38P4-201ENST00000502376 214 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC025465.3-201ENST00000510570 311 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC107393.1-201ENST00000512403 346 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 MTCO3P28-201ENST00000513351 515 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 RNU2-69P-201ENST00000516061 100 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC022880.1-201ENST00000534017 973 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AP002770.2-201ENST00000543613 532 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 MIR3915-201ENST00000578518 97 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC016925.2-201ENST00000605108 242 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AL603755.1-201ENST00000619504 163 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 AC023510.2-201ENST00000622162 746 ntBASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SND1-IT1Q9HBX3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 ZNF355P-201ENST00000427301 3216 ntBASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 RNU6-297P-201ENST00000384636 107 ntBASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 SNORA12-201ENST00000391162 147 ntBASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 AC019129.1-201ENST00000403786 261 ntBASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 RNA5SP425-201ENST00000410336 112 ntBASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
SND1-IT1Q9HBX3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms