Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.09□□□□□ -2.23
CHMP4BQ9H444 BNIP3P31-201ENST00000604515 566 ntBASIC1.09□□□□□ -2.23
CHMP4BQ9H444 AC090578.1-201ENST00000604955 591 ntBASIC1.09□□□□□ -2.23
CHMP4BQ9H444 SNORD114-2-201ENST00000363953 78 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 SNORA4.1-201ENST00000364263 144 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 SNORA12-201ENST00000391162 147 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 TRBVA-201ENST00000498804 316 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 RNU6-276P-201ENST00000516114 96 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 RNA5SP437-201ENST00000517249 129 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.08□□□□□ -2.24
CHMP4BQ9H444 MIR548AC-201ENST00000585049 88 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 AC016727.1-205ENST00000605437 569 ntBASIC1.08□□□□□ -2.24
CHMP4BQ9H444 MTND5P35-201ENST00000557537 1720 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 Y_RNA.46-201ENST00000362695 102 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU6-433P-201ENST00000363216 104 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU6-384P-201ENST00000364900 104 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU6-1179P-201ENST00000384667 107 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU11-5P-201ENST00000391216 129 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU2-64P-201ENST00000411315 191 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AC244505.5-201ENST00000443639 207 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RPS4XP11-201ENST00000446897 772 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AL163195.1-201ENST00000496941 348 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU5F-2P-201ENST00000516066 82 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU6-351P-201ENST00000516097 100 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 RNU2-10P-201ENST00000516375 211 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AC123904.2-201ENST00000548059 300 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AP003465.2-201ENST00000602571 373 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AL158032.1-201ENST00000605401 106 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AL021879.1-201ENST00000611756 288 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 AL359547.2-201ENST00000615810 418 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 OR4G3P-201ENST00000633500 913 ntBASIC1.07□□□□□ -2.24
CHMP4BQ9H444 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.07□□□□□ -2.24
CHMP4BQ9H444 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 SNORD32B-201ENST00000364460 84 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 RNU2-7P-201ENST00000410794 178 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 RNU4-22P-201ENST00000411058 166 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AC123900.1-201ENST00000420390 96 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 HMGN2P9-201ENST00000476875 229 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 MTCO3P9-201ENST00000506989 781 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AC005741.1-201ENST00000511094 432 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 SUMO2P18-201ENST00000518873 252 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 CENPUP1-201ENST00000526649 1202 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
CHMP4BQ9H444 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHMP4BQ9H444 MIR340-201ENST00000362125 95 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 RNY4P16-201ENST00000364768 94 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC007969.2-201ENST00000441891 191 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 ART2BP-201ENST00000453501 499 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC134050.1-201ENST00000495088 933 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 ARL2BPP4-201ENST00000506854 471 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC015688.6-201ENST00000577737 104 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 MTND3P19-201ENST00000603825 345 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AP002782.1-201ENST00000623107 614 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC009033.1-201ENST00000624279 431 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AC099786.3-201ENST00000565735 1410 ntBASIC1.05□□□□□ -2.24
CHMP4BQ9H444 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP4BQ9H444 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP4BQ9H444 RNU5A-4P-201ENST00000516588 111 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.04□□□□□ -2.24
CHMP4BQ9H444 AC010376.1-201ENST00000522101 334 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.04□□□□□ -2.24
CHMP4BQ9H444 AL590229.1-201ENST00000603497 542 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 AC144521.1-201ENST00000607148 956 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 AL133216.2-202ENST00000634512 349 ntBASIC1.04□□□□□ -2.24
CHMP4BQ9H444 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CHMP4BQ9H444 Y_RNA.338-201ENST00000365320 114 ntBASIC1.03□□□□□ -2.24
CHMP4BQ9H444 MIR578-201ENST00000384828 96 ntBASIC1.03□□□□□ -2.24
CHMP4BQ9H444 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CHMP4BQ9H444 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.03□□□□□ -2.24
CHMP4BQ9H444 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.03□□□□□ -2.24
CHMP4BQ9H444 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.03□□□□□ -2.24
CHMP4BQ9H444 EEF1A1P39-201ENST00000440791 250 ntBASIC1.03□□□□□ -2.24
CHMP4BQ9H444 MTND1P30-201ENST00000441241 901 ntBASIC1.03□□□□□ -2.24
CHMP4BQ9H444 SNRPEP8-201ENST00000442866 260 ntBASIC1.03□□□□□ -2.24
CHMP4BQ9H444 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.03□□□□□ -2.24
CHMP4BQ9H444 snoU13.30-201ENST00000458951 104 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms