Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC091951.3-201ENST00000504093 246 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC108078.1-201ENST00000508073 725 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 RNU5F-2P-201ENST00000516066 82 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC091544.4-201ENST00000555268 342 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC018889.1-201ENST00000605372 397 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC120349.3-201ENST00000624377 529 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 AL157786.1-207ENST00000627771 695 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC006927.4-201ENST00000639187 543 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
VCX3BQ9H321 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 MIR340-201ENST00000362125 95 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 RNU5E-7P-201ENST00000365290 117 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 RNU6-296P-201ENST00000384608 107 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 MRPL35P1-201ENST00000404272 572 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 RN7SKP61-201ENST00000410642 295 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 RPS24P1-201ENST00000438550 371 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 FTH1P25-201ENST00000447665 469 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 HSPE1P13-201ENST00000451143 297 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 ART2BP-201ENST00000453501 499 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 MTND4LP18-201ENST00000526864 291 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 AL034555.1-201ENST00000604816 211 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 BX284668.6-201ENST00000606899 438 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 AC104010.1-201ENST00000616889 150 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 AL031667.3-201ENST00000620124 655 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 AC097372.5-201ENST00000623665 376 ntBASIC0.85□□□□□ -2.27
VCX3BQ9H321 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.85□□□□□ -2.27
VCX3BQ9H321 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
VCX3BQ9H321 AL391994.1-201ENST00000254724 282 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
VCX3BQ9H321 RNU6-533P-201ENST00000384144 107 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 MIR558-201ENST00000384920 94 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AL606490.4-201ENST00000423117 127 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC137499.1-201ENST00000427602 88 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 MED13P1-201ENST00000428342 171 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 FTH1P12-201ENST00000432137 551 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC000111.3-201ENST00000433478 193 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.84□□□□□ -2.27
VCX3BQ9H321 RPS4XP11-201ENST00000446897 772 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 RPL31P3-201ENST00000458430 332 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AL163195.1-201ENST00000496941 348 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 RBBP4P6-201ENST00000508098 202 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC115990.1-201ENST00000526957 301 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AP002453.2-201ENST00000533503 320 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 MIR5094-201ENST00000578766 85 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC008521.1-201ENST00000587471 187 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 MIR6852-201ENST00000621699 66 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 AP002371.2-201ENST00000624450 503 ntBASIC0.84□□□□□ -2.27
VCX3BQ9H321 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
VCX3BQ9H321 AC100821.1-201ENST00000523153 2479 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 RNU4-15P-201ENST00000362613 141 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 RNU6-1285P-201ENST00000363480 105 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 RNU6-371P-201ENST00000364283 108 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 RNU6-61P-201ENST00000365528 109 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 MIR544A-201ENST00000384855 91 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 MTCYBP36-201ENST00000404146 440 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 RNU2-39P-201ENST00000410604 198 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.83□□□□□ -2.28
VCX3BQ9H321 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.83□□□□□ -2.28
VCX3BQ9H321 AL589872.1-201ENST00000426602 288 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC119618.1-201ENST00000434191 222 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 MTND1P30-201ENST00000441241 901 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 HMGN2P18-201ENST00000450680 270 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC087343.1-201ENST00000477341 475 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC145146.1-201ENST00000496370 254 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC010587.1-201ENST00000505809 469 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC097473.1-201ENST00000508142 408 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC005741.1-201ENST00000511094 432 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC112206.4-201ENST00000515142 405 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC091489.2-201ENST00000566263 604 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 MIR5697-201ENST00000578045 78 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC073539.2-201ENST00000597113 165 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC018714.1-201ENST00000605028 208 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
VCX3BQ9H321 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.83□□□□□ -2.28
VCX3BQ9H321 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VCX3BQ9H321 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms