Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-6P-201ENST00000606623 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC069294.1-201ENST00000608397 350 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC024581.2-201ENST00000619986 252 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 CASC19-280ENST00000642102 1351 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC002543.1-201ENST00000299783 1954 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 Y_RNA.86-201ENST00000363020 111 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 RNU6-527P-201ENST00000363425 104 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 Z98742.2-201ENST00000431564 187 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 MTCO2P3-201ENST00000442543 421 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC018710.1-201ENST00000506509 158 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 PRDX4P1-201ENST00000507189 574 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 SNORA19.2-201ENST00000516013 114 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC026464.5-201ENST00000562497 722 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 CTHRC1P1-201ENST00000605383 469 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC013412.1-201ENST00000610687 192 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AL121757.2-201ENST00000611223 313 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AL137847.3-201ENST00000611521 109 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 DUXAP9-208ENST00000622815 614 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USP44Q9H0E7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
USP44Q9H0E7 Z75746.1-201ENST00000440243 2080 ntBASIC2.8□□□□□ -1.96
USP44Q9H0E7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.79□□□□□ -1.96
USP44Q9H0E7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP44Q9H0E7 RNU6-529P-201ENST00000363383 104 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 SNORD113-7-201ENST00000363762 77 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP44Q9H0E7 RNU6-128P-201ENST00000383976 107 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 RNU1-138P-201ENST00000384093 164 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 RPS29P13-201ENST00000402041 169 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AL356776.1-201ENST00000406574 447 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
USP44Q9H0E7 AL356320.1-201ENST00000429616 163 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 RPS15AP10-201ENST00000432472 382 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.79□□□□□ -1.96
USP44Q9H0E7 AL445687.1-201ENST00000439946 251 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 RN7SKP40-201ENST00000517211 242 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.79□□□□□ -1.96
USP44Q9H0E7 AP000889.2-201ENST00000532684 490 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC100830.2-201ENST00000581636 240 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC090897.2-201ENST00000581715 130 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 MIR3117-201ENST00000584034 78 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC018638.8-201ENST00000588755 281 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC009314.1-201ENST00000603871 304 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 BNIP3P10-201ENST00000605360 577 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 RNU6-85P-201ENST00000605989 107 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC009831.4-201ENST00000620744 325 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC099654.14-201ENST00000638599 341 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP44Q9H0E7 AC080128.1-201ENST00000474389 1917 ntBASIC2.79□□□□□ -1.96
USP44Q9H0E7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP44Q9H0E7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP44Q9H0E7 RNU6-105P-201ENST00000363909 104 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 RNU6-214P-201ENST00000384130 107 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 MT-TL1-201ENST00000386347 75 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 CYCSP48-201ENST00000417124 323 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AC138623.1-201ENST00000418060 216 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 MTCO3P18-201ENST00000440206 761 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 RPL32P28-201ENST00000443577 397 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AC007547.1-201ENST00000462177 490 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AP000852.1-201ENST00000472460 573 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 RPL23AP70-201ENST00000483361 460 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AP001025.1-201ENST00000486139 332 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AC023141.11-201ENST00000508864 202 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 FAM206BP-201ENST00000510179 541 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 RNU6-1314P-201ENST00000517139 104 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 AC123912.5-201ENST00000605470 343 ntBASIC2.78□□□□□ -1.96
USP44Q9H0E7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.78□□□□□ -1.96
USP44Q9H0E7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
USP44Q9H0E7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP44Q9H0E7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP44Q9H0E7 RNU1-57P-201ENST00000384491 166 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 RNU6-876P-201ENST00000391295 104 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 RNU2-23P-201ENST00000410545 195 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 AL513185.2-201ENST00000425543 193 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.77□□□□□ -1.97
USP44Q9H0E7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.77□□□□□ -1.97
USP44Q9H0E7 AL359672.1-201ENST00000442302 409 ntBASIC2.77□□□□□ -1.97
USP44Q9H0E7 snoU13.14-201ENST00000459372 104 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms