Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SNORA71B-202ENST00000439232 272 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 AC096638.1-201ENST00000444678 216 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SEPT14P8-201ENST00000508026 178 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 RAC1P2-201ENST00000511164 579 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 SNORD113-5-201ENST00000607261 78 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 AC024581.2-201ENST00000619986 252 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 AC058791.1-201ENST00000608412 3198 ntBASIC3.86□□□□□ -1.79
FOXP3Q9BZS1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 AC022336.2-201ENST00000568966 2538 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 PWAR6-201ENST00000552334 4618 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 RNU5B-2P-201ENST00000363036 113 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 RNU6-326P-201ENST00000365480 107 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 RNU1-73P-201ENST00000383971 164 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 MIR449B-201ENST00000384995 97 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP424-201ENST00000390988 115 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 SNORA53-201ENST00000391141 249 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 UBA52P6-201ENST00000399822 382 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 SNORA11.1-201ENST00000408133 129 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 SSXP4-201ENST00000451349 245 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 AC027288.2-201ENST00000553028 243 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 MIR4423-201ENST00000580922 80 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 SNORA62.6-201ENST00000606322 83 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 AC069200.1-201ENST00000609511 323 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 MIR6134-201ENST00000617606 109 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 SNORA43.4-201ENST00000629559 138 ntBASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXP3Q9BZS1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 RNU6-774P-201ENST00000363238 107 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 SNORD12B-201ENST00000410433 91 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AC093578.1-201ENST00000415219 368 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 HMGN2P30-201ENST00000423237 256 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 SETP5-201ENST00000437270 562 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 RPL37P4-201ENST00000448908 268 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 SNORA25.14-201ENST00000516481 132 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 RN7SKP49-201ENST00000516675 260 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AK6P2-201ENST00000549020 471 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 MIR4425-201ENST00000580572 84 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 MIR3944-201ENST00000581277 108 ntBASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXP3Q9BZS1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
FOXP3Q9BZS1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.8
FOXP3Q9BZS1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.8
FOXP3Q9BZS1 SNORA63.1-201ENST00000362493 131 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNA5SP361-201ENST00000362686 118 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNU6-137P-201ENST00000363680 108 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNU1-100P-201ENST00000365255 165 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNU6-142P-201ENST00000384019 107 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 U8.10-201ENST00000384260 133 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 SNORD116-20-201ENST00000384529 92 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 SNORA19-201ENST00000384737 128 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNU5A-5P-201ENST00000411054 116 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AC007969.2-201ENST00000441891 191 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 NDUFB4P10-201ENST00000452541 359 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 COX6CP14-201ENST00000469580 174 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RPL7P49-201ENST00000471402 708 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RPL26P26-201ENST00000480251 434 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AC097462.2-201ENST00000504623 481 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNU2-31P-201ENST00000516954 155 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AP002392.1-201ENST00000537692 208 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 CYCSP30-201ENST00000546447 172 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 CR383656.8-201ENST00000549046 145 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 MIR3186-201ENST00000577404 85 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AC020895.1-201ENST00000595362 272 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms