Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 BNIP3P6-201ENST00000549284 499 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 MIR4698-201ENST00000577795 80 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 MIR3146-201ENST00000580367 79 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 BNIP3P26-201ENST00000600827 554 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 AC084824.5-201ENST00000612009 413 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 MIR6835-201ENST00000621552 64 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 FRG1KP-201ENST00000623592 341 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.42□□□□□ -2.34
LIMD2Q9BT23 MIR320C1-201ENST00000408566 88 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.41□□□□□ -2.34
LIMD2Q9BT23 ARL5AP1-201ENST00000418991 388 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC010099.3-201ENST00000423896 409 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC007969.2-201ENST00000441891 191 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 snoU13.27-201ENST00000459278 104 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 snoU109.2-201ENST00000459316 135 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC022447.4-201ENST00000504053 364 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 ARL2BPP4-201ENST00000506854 471 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC119751.4-201ENST00000507498 357 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 RNU5F-2P-201ENST00000516066 82 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 RNU6-1028P-201ENST00000517164 93 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
LIMD2Q9BT23 HSPE1P4-201ENST00000550617 308 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC133485.1-201ENST00000567176 124 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC138907.6-201ENST00000568401 126 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC107304.1-201ENST00000604229 296 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 AC092574.1-201ENST00000609771 420 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 uc_338.17-201ENST00000619633 179 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 RMST_7.1-201ENST00000621935 268 ntBASIC0.41□□□□□ -2.34
LIMD2Q9BT23 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU4-15P-201ENST00000362613 141 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-462P-201ENST00000362659 105 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 SNORD114-27-201ENST00000363766 70 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-960P-201ENST00000364056 120 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-17P-201ENST00000384245 107 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-18P-201ENST00000384527 107 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AL603865.2-201ENST00000401679 213 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RAP1BP3-201ENST00000407180 549 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-733P-201ENST00000410759 104 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-1054P-201ENST00000411293 104 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 MTCO2P1-201ENST00000424648 477 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 MTCO3P29-201ENST00000432119 779 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.4□□□□□ -2.35
LIMD2Q9BT23 SNRPFP3-201ENST00000457792 225 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC093899.1-201ENST00000457984 376 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 MTND1P16-201ENST00000465177 898 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RPS27P22-201ENST00000478056 241 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RAP1BP2-201ENST00000478270 544 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC113347.3-201ENST00000509113 148 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNA5SP216-201ENST00000516111 123 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 RNU6-165P-201ENST00000517170 99 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.4□□□□□ -2.35
LIMD2Q9BT23 OR8K2P-201ENST00000524645 927 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC115990.1-201ENST00000526957 301 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AL442163.3-201ENST00000554110 156 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC008015.1-201ENST00000555505 465 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.4□□□□□ -2.35
LIMD2Q9BT23 VN1R82P-201ENST00000601481 356 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AL590229.1-201ENST00000603497 542 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AP002802.2-201ENST00000605877 235 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC006270.3-201ENST00000605967 1036 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 AC040896.1-201ENST00000613819 479 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.4□□□□□ -2.35
LIMD2Q9BT23 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 MTND4P16-201ENST00000466108 1367 ntBASIC0.4□□□□□ -2.35
LIMD2Q9BT23 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 RNU6-1285P-201ENST00000363480 105 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 RNU5E-6P-201ENST00000365574 115 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 MIR200A-201ENST00000384875 90 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AL117342.1-201ENST00000404861 406 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 MTND4P3-201ENST00000417829 541 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AL122001.1-201ENST00000457027 370 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AC117454.1-201ENST00000491120 168 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 RNA5SP102-201ENST00000516865 106 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 BNIP3P16-201ENST00000589779 534 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AC022432.1-201ENST00000595739 310 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 KC877982.1-201ENST00000602313 470 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AL138955.1-201ENST00000622881 1040 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 AC068647.2-201ENST00000637380 353 ntBASIC0.39□□□□□ -2.35
LIMD2Q9BT23 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
LIMD2Q9BT23 RNU6-1123P-201ENST00000362347 106 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RNU6-862P-201ENST00000362804 105 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 SNORD56.1-201ENST00000362913 68 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RNU6-511P-201ENST00000363496 107 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RNU6-560P-201ENST00000364007 108 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 Y_RNA.311-201ENST00000365068 96 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 MIR508-201ENST00000384857 115 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 MIR10A-201ENST00000385043 110 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms