Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC010300.1-201ENST00000600671 5134 ntBASIC4.5□□□□□ -1.69
USB1Q9BQ65 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USB1Q9BQ65 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 RNA5SP502-201ENST00000362694 119 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 RNU6-655P-201ENST00000362858 107 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 RNU6-508P-201ENST00000363231 103 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 MIR3065-201ENST00000390137 79 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 SNORA12-201ENST00000391162 147 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 AC126124.2-201ENST00000413542 321 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 AL135786.1-201ENST00000415892 214 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 AL732292.1-201ENST00000426692 226 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 COX6CP13-201ENST00000428703 226 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 RN7SL814P-201ENST00000487715 300 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 RN7SKP289-201ENST00000517244 295 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 RPL17P51-201ENST00000605218 238 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 SNX18P1Y-201ENST00000616231 511 ntBASIC4.49□□□□□ -1.69
USB1Q9BQ65 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USB1Q9BQ65 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
USB1Q9BQ65 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
USB1Q9BQ65 INTS6P1-201ENST00000504674 2530 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USB1Q9BQ65 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
USB1Q9BQ65 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 SNORA27.1-201ENST00000362604 124 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RNU6-271P-201ENST00000363858 105 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 SNORA51.4-201ENST00000364993 124 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RPL12P3-201ENST00000440080 396 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RPS26P55-201ENST00000471178 356 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RN7SL826P-201ENST00000479724 288 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RN7SL441P-201ENST00000492388 296 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RNA5SP497-201ENST00000516081 97 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RNA5SP153-201ENST00000516498 76 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
USB1Q9BQ65 TRAV8-5-201ENST00000537369 341 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 MIR3609-201ENST00000582661 80 ntBASIC4.48□□□□□ -1.69
USB1Q9BQ65 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.48□□□□□ -1.69
USB1Q9BQ65 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.48□□□□□ -1.69
USB1Q9BQ65 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USB1Q9BQ65 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 AL356292.1-201ENST00000283110 373 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 snoU2_19.1-201ENST00000362361 80 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 DYNLT3P1-201ENST00000378574 347 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 RNU6-106P-201ENST00000384405 107 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 MIR147B-201ENST00000390185 80 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 MIR937-201ENST00000401271 86 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 RNU2-70P-201ENST00000410718 179 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 AC006466.1-201ENST00000438721 289 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 AL645939.1-201ENST00000453429 797 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 RBMY2UP-201ENST00000453474 324 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 snoU13.28-201ENST00000459235 104 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 HMGN2P9-201ENST00000476875 229 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 VWA8P1-201ENST00000510889 176 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 RN7SKP46-201ENST00000515942 234 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 MIR3690-201ENST00000580266 75 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USB1Q9BQ65 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
USB1Q9BQ65 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.47□□□□□ -1.69
USB1Q9BQ65 AC006971.1-201ENST00000407916 4486 ntBASIC4.46□□□□□ -1.69
USB1Q9BQ65 MTND5P18-201ENST00000445624 1801 ntBASIC4.46□□□□□ -1.69
USB1Q9BQ65 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USB1Q9BQ65 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms