Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNU6-505P-201ENST00000384427 107 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 Y_RNA.512-201ENST00000384518 102 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 MIR153-2-201ENST00000385225 87 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LITAFQ99732 SNORA26.3-201ENST00000391119 136 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.19□□□□□ -2.06
LITAFQ99732 HMGN2P20-201ENST00000437531 273 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AL731563.1-201ENST00000442202 214 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 DYNLT3P2-201ENST00000442517 295 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 FCF1P4-201ENST00000448326 183 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 RN7SKP43-201ENST00000516173 320 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 RNU6-711P-201ENST00000517255 106 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AC034114.1-201ENST00000520293 285 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.19□□□□□ -2.06
LITAFQ99732 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.19□□□□□ -2.06
LITAFQ99732 AC090517.1-201ENST00000569307 266 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AC006006.1-201ENST00000603082 144 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AL391813.1-201ENST00000603098 260 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AL590392.1-201ENST00000604960 446 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 RNU6-91P-201ENST00000607774 107 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AL359198.2-201ENST00000611836 194 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AC010205.1-201ENST00000616668 449 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AC007792.1-201ENST00000623023 402 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 AC002543.1-201ENST00000299783 1954 ntBASIC2.19□□□□□ -2.06
LITAFQ99732 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LITAFQ99732 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LITAFQ99732 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LITAFQ99732 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LITAFQ99732 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LITAFQ99732 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.18□□□□□ -2.06
LITAFQ99732 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LITAFQ99732 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.18□□□□□ -2.06
LITAFQ99732 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.18□□□□□ -2.06
LITAFQ99732 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LITAFQ99732 RNU1-76P-201ENST00000362903 159 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 SNORA51.1-201ENST00000363243 140 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 SNORA14A-201ENST00000364773 135 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 RNU6-702P-201ENST00000364982 107 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 Y_RNA.401-201ENST00000383965 117 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 Y_RNA.471-201ENST00000384312 102 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 MIR181B1-201ENST00000385240 110 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 MIR147B-201ENST00000390185 80 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 SNORA48.8-201ENST00000391324 134 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 ELOCP20-201ENST00000422460 345 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.18□□□□□ -2.06
LITAFQ99732 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.18□□□□□ -2.06
LITAFQ99732 RPS12P18-201ENST00000442381 270 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 PPIAP20-201ENST00000449839 135 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.18□□□□□ -2.06
LITAFQ99732 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.18□□□□□ -2.06
LITAFQ99732 AL441985.1-201ENST00000457727 251 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AP004217.1-201ENST00000480579 346 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AC010469.2-201ENST00000496412 480 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 SNORA25.11-201ENST00000515935 105 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 RNU6-397P-201ENST00000516226 104 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.18□□□□□ -2.06
LITAFQ99732 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.18□□□□□ -2.06
LITAFQ99732 AP002770.2-201ENST00000543613 532 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.18□□□□□ -2.06
LITAFQ99732 AC021231.3-201ENST00000558497 370 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 MYL12BP1-201ENST00000569826 507 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.18□□□□□ -2.06
LITAFQ99732 RPS15AP11-201ENST00000594193 385 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 SDR42E1P1-201ENST00000611327 477 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 AC137590.2-201ENST00000619709 240 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LITAFQ99732 AC091152.2-201ENST00000591628 2569 ntBASIC2.18□□□□□ -2.06
LITAFQ99732 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LITAFQ99732 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LITAFQ99732 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LITAFQ99732 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.17□□□□□ -2.06
LITAFQ99732 MAPK10-322ENST00000641485 4530 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
LITAFQ99732 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
LITAFQ99732 U8.10-201ENST00000384260 133 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 RNY3P4-201ENST00000384428 101 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 RN7SKP111-201ENST00000410349 271 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 CYCSP48-201ENST00000417124 323 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.17□□□□□ -2.06
LITAFQ99732 AL590135.1-201ENST00000422215 156 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC019205.3-201ENST00000424573 156 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 USP9YP16-201ENST00000430287 407 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 SETP5-201ENST00000437270 562 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.17□□□□□ -2.06
LITAFQ99732 RPEP5-201ENST00000441137 268 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC016700.2-201ENST00000446011 156 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 USP9YP23-201ENST00000455085 407 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.17□□□□□ -2.06
LITAFQ99732 AP000870.1-201ENST00000472927 406 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 GZMAP1-201ENST00000503054 631 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.17□□□□□ -2.06
LITAFQ99732 SNORA31.16-201ENST00000516773 139 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 RNU6-897P-201ENST00000517135 105 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC022868.1-201ENST00000517767 391 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 MRPL49P2-201ENST00000521066 465 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC115990.1-201ENST00000526957 301 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC007536.1-201ENST00000533382 349 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AC105137.2-201ENST00000569073 466 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AL078605.1-201ENST00000603529 500 ntBASIC2.17□□□□□ -2.06
LITAFQ99732 AL137843.1-201ENST00000605078 385 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms