Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AP001485.1-201ENST00000604799 199 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC018889.1-201ENST00000605372 397 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC123912.5-201ENST00000605470 343 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.21□□□□□ -2.22
VAT1Q99536 AC104073.3-201ENST00000610942 955 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 RMST_4.1-201ENST00000616886 107 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC097372.5-201ENST00000623665 376 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 AC120349.3-201ENST00000624377 529 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VAT1Q99536 LINC02555-201ENST00000563933 1951 ntBASIC1.21□□□□□ -2.22
VAT1Q99536 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.2□□□□□ -2.22
VAT1Q99536 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VAT1Q99536 Y_RNA.22-201ENST00000362492 102 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 RNU4-15P-201ENST00000362613 141 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 RNU6-527P-201ENST00000363425 104 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 RNU6-1285P-201ENST00000363480 105 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 RNU6-271P-201ENST00000363858 105 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 RNA5SP99-201ENST00000364020 114 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 Y_RNA.332-201ENST00000365271 113 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 RNU5E-7P-201ENST00000365290 117 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VAT1Q99536 SNORA12-201ENST00000391162 147 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AL008987.1-201ENST00000415528 237 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 C1DP2-201ENST00000418167 426 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.2□□□□□ -2.22
VAT1Q99536 RPS24P1-201ENST00000438550 371 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VAT1Q99536 DUXAP8-207ENST00000456786 622 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AL049829.1-201ENST00000465411 156 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AC087477.1-201ENST00000465747 340 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.2□□□□□ -2.22
VAT1Q99536 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.2□□□□□ -2.22
VAT1Q99536 SUB1P3-201ENST00000564581 315 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 SNORA77B-201ENST00000578179 125 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 MTCO2P2-201ENST00000591258 225 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AC073539.2-201ENST00000597113 165 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AL359999.1-201ENST00000604513 294 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
VAT1Q99536 AL359740.1-201ENST00000624340 592 ntBASIC1.2□□□□□ -2.22
VAT1Q99536 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.2□□□□□ -2.22
VAT1Q99536 MIR378A-201ENST00000362177 66 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 RNU5F-6P-201ENST00000362979 116 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 RNU6-641P-201ENST00000384006 107 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 MRPL42P2-201ENST00000403169 426 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 RNU2-3P-201ENST00000410144 191 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
VAT1Q99536 ELOCP4-201ENST00000420090 333 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 AL022238.1-201ENST00000442557 355 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.19□□□□□ -2.22
VAT1Q99536 RNU1-131P-201ENST00000458943 161 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
VAT1Q99536 AC068205.3-201ENST00000636385 468 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 U4.7-201ENST00000638126 106 ntBASIC1.19□□□□□ -2.22
VAT1Q99536 AC233981.2-201ENST00000611524 1614 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
VAT1Q99536 SNORD113-6-201ENST00000363345 75 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 RNU6-501P-201ENST00000364072 100 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 RNU6-296P-201ENST00000384608 107 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 MIR513B-201ENST00000385136 84 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 MTND5P25-201ENST00000430499 799 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 AL365184.2-201ENST00000431139 435 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 AC004854.1-201ENST00000440356 349 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 ART2BP-201ENST00000453501 499 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 RPL31P58-201ENST00000469001 379 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 AC099513.1-201ENST00000490423 301 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 AC145146.1-201ENST00000496370 254 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.18□□□□□ -2.22
VAT1Q99536 MTND3P5-201ENST00000512798 333 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 AC115990.1-201ENST00000526957 301 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.18□□□□□ -2.22
VAT1Q99536 PCMTD1P2-201ENST00000565017 355 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 MIR5094-201ENST00000578766 85 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
VAT1Q99536 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VAT1Q99536 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
VAT1Q99536 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VAT1Q99536 RNU6-607P-201ENST00000411283 108 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 MTCO2P8-201ENST00000412213 658 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 CYCSP33-201ENST00000414485 327 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 SSR1P2-201ENST00000415208 787 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VAT1Q99536 RPS6P15-201ENST00000431996 751 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.17□□□□□ -2.22
VAT1Q99536 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.17□□□□□ -2.22
VAT1Q99536 FTH1P25-201ENST00000447665 469 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.17□□□□□ -2.22
VAT1Q99536 AC132942.1-201ENST00000486753 483 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 RNU6-685P-201ENST00000517088 95 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 VN1R80P-201ENST00000597126 338 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 AL034555.1-201ENST00000604816 211 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 AC019226.2-201ENST00000625973 424 ntBASIC1.17□□□□□ -2.22
VAT1Q99536 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
VAT1Q99536 MTND5P9-201ENST00000503854 1755 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms