Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 MZT1P2-201ENST00000604387 248 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC008962.1-201ENST00000605729 304 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR8076-201ENST00000611401 83 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC022149.2-201ENST00000621061 203 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 Z83843.1-201ENST00000604070 3685 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.122-201ENST00000363331 96 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 U3.13-201ENST00000364804 214 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 SNORA36C-201ENST00000384289 132 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 BX679664.1-201ENST00000434429 253 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RPS29P27-201ENST00000463711 170 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RPL23AP45-201ENST00000476406 468 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RPS15AP34-201ENST00000487776 387 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RPS23P5-201ENST00000495419 428 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 RN7SKP289-201ENST00000517244 295 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK5RAP1Q96SZ6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 ZNF826P-207ENST00000622273 1910 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AC135776.4-201ENST00000624300 1904 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 RNA5SP267-201ENST00000364893 126 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 RNY4P28-201ENST00000365281 93 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.398-201ENST00000383952 99 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-882P-201ENST00000391025 103 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU4-30P-201ENST00000410245 143 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL096701.2-201ENST00000416920 238 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL117339.3-201ENST00000418733 162 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 snoU13.3-201ENST00000459441 104 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 RN7SL807P-201ENST00000470923 297 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-612P-201ENST00000516909 102 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL157871.3-201ENST00000557231 293 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR4659A-201ENST00000580269 81 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AC011921.3-201ENST00000605540 361 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 AL353748.2-201ENST00000622148 471 ntBASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.55□□□□□ -1.84
CDK5RAP1Q96SZ6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU5A-1-201ENST00000362698 116 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-1290P-201ENST00000362957 109 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.123-201ENST00000363338 102 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-923P-201ENST00000364753 107 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.292-201ENST00000364904 97 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNY3P4-201ENST00000384428 101 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR613-201ENST00000385248 95 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AC091390.3-201ENST00000426478 338 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 NDUFB4P10-201ENST00000452541 359 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AC091021.1-201ENST00000468051 388 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AL049874.1-201ENST00000489560 388 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 HMGB1P22-201ENST00000505315 124 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-1012P-201ENST00000516606 109 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR4276-201ENST00000584832 70 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AL355812.1-201ENST00000603215 216 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AC007179.3-201ENST00000604976 235 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 AC004852.3-201ENST00000614131 326 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CDK5RAP1Q96SZ6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms