Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
HAPLN3Q96S86 AL136164.4-201ENST00000625013 2135 ntBASIC3.25□□□□□ -1.89
HAPLN3Q96S86 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
HAPLN3Q96S86 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 Y_RNA.39-201ENST00000362620 98 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 RNU6-238P-201ENST00000363313 106 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 Z98749.2-208ENST00000381646 500 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 RNU6-72P-201ENST00000384285 79 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 Y_RNA.512-201ENST00000384518 102 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 SNORD15B-201ENST00000384714 146 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 RNU6-1109P-201ENST00000391187 107 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AL138885.1-201ENST00000405921 675 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 MIR5188-201ENST00000583467 113 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC078899.3-201ENST00000599065 212 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC008121.1-201ENST00000603244 268 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC009314.1-201ENST00000603871 304 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC068831.7-201ENST00000616954 363 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC073308.1-201ENST00000623696 305 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 AC090617.7-201ENST00000623952 126 ntBASIC3.24□□□□□ -1.89
HAPLN3Q96S86 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
HAPLN3Q96S86 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RNU4-42P-201ENST00000364738 142 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 U3.37-201ENST00000408528 213 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RPL21P2-201ENST00000440049 481 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AC098831.1-201ENST00000440661 216 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RPL27AP5-201ENST00000469428 449 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 RPS27AP10-201ENST00000496103 208 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 Y_RNA.721-201ENST00000517207 102 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AL161670.1-201ENST00000554348 137 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AL391261.3-201ENST00000557194 520 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AL355596.1-201ENST00000565399 3996 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AC008669.1-201ENST00000565823 2178 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 MIR5696-201ENST00000578474 85 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 UBL5P2-201ENST00000583788 219 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AL162274.2-201ENST00000614406 332 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 AL161629.2-201ENST00000615347 275 ntBASIC3.23□□□□□ -1.89
HAPLN3Q96S86 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HAPLN3Q96S86 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 RNU6-428P-201ENST00000362942 107 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 RNU6-702P-201ENST00000364982 107 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MIR518D-201ENST00000385014 87 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AL591034.2-201ENST00000402839 359 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 RNU6-101P-201ENST00000410323 104 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AC013470.1-201ENST00000453438 462 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 snoU109.2-201ENST00000459316 135 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MRPS35P2-201ENST00000508242 191 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 Y_RNA.687-201ENST00000516558 91 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AP002404.1-201ENST00000532005 451 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 HSBP1P1-201ENST00000555205 166 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MIR5701-3-201ENST00000578890 82 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MIR4513-201ENST00000581077 86 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MIR5701-1-201ENST00000585138 82 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AC004832.5-201ENST00000608677 401 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AC090425.1-201ENST00000610007 140 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MIR5701-2-201ENST00000615634 82 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 MIR6134-201ENST00000617606 109 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 AL353743.1-202ENST00000431724 1695 ntBASIC3.22□□□□□ -1.89
HAPLN3Q96S86 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
HAPLN3Q96S86 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
HAPLN3Q96S86 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HAPLN3Q96S86 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HAPLN3Q96S86 SNORD50.1-201ENST00000362987 71 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 RNU6-933P-201ENST00000384424 107 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 RNU6-1222P-201ENST00000384615 107 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 MIR521-1-201ENST00000384902 87 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HAPLN3Q96S86 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.21□□□□□ -1.9
HAPLN3Q96S86 UBA52P6-201ENST00000399822 382 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 BMS1P22-201ENST00000414726 313 ntBASIC3.21□□□□□ -1.9
HAPLN3Q96S86 CBX3P6-201ENST00000430257 527 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms