Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC073910.1-201ENST00000445047 438 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC003071.1-201ENST00000451219 789 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC108059.3-201ENST00000456388 214 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 snoU13.27-201ENST00000459278 104 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.39□□□□□ -2.35
AP1S3Q96PC3 Y_RNA.687-201ENST00000516558 91 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 SNORD60.2-201ENST00000516883 86 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 SUMO2P18-201ENST00000518873 252 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AP003484.1-201ENST00000530974 250 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AL590705.4-201ENST00000532209 134 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC004812.1-201ENST00000540773 146 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC087897.1-201ENST00000550134 156 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC109446.2-201ENST00000567872 497 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 MIR3146-201ENST00000580367 79 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 MIR4524B-201ENST00000581569 115 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC068620.3-201ENST00000602749 560 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AP002802.2-201ENST00000605877 235 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC104073.3-201ENST00000610942 955 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 AC007792.1-201ENST00000623023 402 ntBASIC0.39□□□□□ -2.35
AP1S3Q96PC3 MIR373-201ENST00000362273 69 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 RNU4-79P-201ENST00000362764 141 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 SNORD12-201ENST00000391002 90 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 MTCO1P17-201ENST00000411522 491 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 BTF3L4P1-201ENST00000413813 468 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 RPS3AP37-201ENST00000419176 745 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC011233.1-201ENST00000422812 283 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AL008629.1-201ENST00000438615 184 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC007969.2-201ENST00000441891 191 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 RNU6-953P-201ENST00000459154 107 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC048334.1-201ENST00000477975 159 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 HMGN1P7-201ENST00000491722 313 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 RNU4-54P-201ENST00000516428 129 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 DEFB130C-202ENST00000530001 230 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AL121579.1-201ENST00000555129 305 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.38□□□□□ -2.35
AP1S3Q96PC3 VN1R87P-201ENST00000596706 487 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC124016.2-201ENST00000610058 665 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC104465.1-201ENST00000611365 139 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 AC131159.1-201ENST00000621854 213 ntBASIC0.38□□□□□ -2.35
AP1S3Q96PC3 RNU6-384P-201ENST00000364900 104 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 RNA5SP259-201ENST00000365541 109 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 MIR200A-201ENST00000384875 90 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 MIR10A-201ENST00000385043 110 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 SNRPEP7-201ENST00000438350 220 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC093899.1-201ENST00000457984 376 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.37□□□□□ -2.35
AP1S3Q96PC3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC005840.1-201ENST00000498412 377 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 MTCO3P9-201ENST00000506989 781 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AF131216.2-201ENST00000512316 564 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 SNORA31.2-201ENST00000516019 134 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 RNU6-334P-201ENST00000517072 102 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.37□□□□□ -2.35
AP1S3Q96PC3 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC091135.1-201ENST00000585943 307 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC105148.1-201ENST00000604961 409 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC016727.1-205ENST00000605437 569 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 AC083806.3-201ENST00000614016 455 ntBASIC0.37□□□□□ -2.35
AP1S3Q96PC3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RNU6-236P-201ENST00000363886 106 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RNU6-395P-201ENST00000365662 106 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RNU6-110P-201ENST00000384508 104 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RAB28P5-201ENST00000427490 651 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL627311.1-201ENST00000431514 115 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RSL24D1P8-201ENST00000434442 492 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL117351.1-201ENST00000438864 766 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 MTND1P18-201ENST00000448191 573 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RPS26P45-201ENST00000471748 340 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 RPS26P48-201ENST00000491713 339 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC112206.3-201ENST00000514578 389 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 SUMO2P16-201ENST00000519475 264 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC022784.5-201ENST00000522241 437 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC025423.5-201ENST00000550230 219 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 HSPE1P4-201ENST00000550617 308 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC008015.1-201ENST00000555505 465 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 BNIP3P8-201ENST00000597863 560 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms